RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 ITCHQ96J02 903 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 MSLNLQ96KJ4 702 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 TSGA13Q96PP4 275 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 NT5C1AQ9BXI3 368 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 CDCA4Q9BXL8 241 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 PIF1Q9H611 641 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 LDAHQ9H6V9 325 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 TRIM45Q9H8W5 580 aaPredicted RBP9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 PXMP2Q9NR77 195 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 RBFOX1Q9NWB1 397 aaKnown RBP9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 PCDH10Q9P2E7 1040 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 UTS2RQ9UKP6 389 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 U3KQV3 271 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 MGAMO43451 1857 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 SLC12A8A0AV02 714 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 ZNF98A6NK75 572 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 YKT6O15498 198 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 NPR3P17342 541 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 PTBP1P26599 531 aaKnown RBP eCLIP9.6□□□□□ -0.874e-7■■■■■ 33.7
HMBOX1-201ENST00000287701 SLC19A1P41440 591 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 MAP2K3P46734 347 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 ATXN1P54253 815 aaKnown RBP9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 FLI1Q01543 452 aaPredicted RBP9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 CREMQ03060 361 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 CAPSQ13938 189 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 HECTD2Q5U5R9 776 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 LCN1P1Q5VSP4 162 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 CACHD1Q5VU97 1274 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 ATG9BQ674R7 924 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 ZSWIM9Q86XI8 627 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 C1orf127Q8N9H9 656 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 ZBTB44Q8NCP5 570 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 ST8SIA4Q92187 359 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 RADILQ96JH8 1075 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 PELOQ9BRX2 385 aaKnown RBP9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 PRRG3Q9BZD7 231 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 ASB7Q9H672 318 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 POPDC3Q9HBV1 291 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 POLMQ9NP87 494 aaPredicted RBP9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 EVA1BQ9NVM1 165 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 ING4Q9UNL4 249 aa9.6□□□□□ -0.87
HMBOX1-201ENST00000287701 TSC2P49815 1807 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 A0A087WZ62 844 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 CREG1O75629 220 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 UROSP10746 265 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 COL6A1P12109 1028 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 RPS3P23396 243 aaKnown RBP eCLIP9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 SOX11P35716 441 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 HOXA1P49639 335 aaPredicted RBP9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 CLCNKAP51800 687 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 RPP38P78345 283 aaKnown RBP9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 CYP4F3Q08477 520 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 NPRL3Q12980 569 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 ZMAT1Q5H9K5 638 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 ATF7IP2Q5U623 682 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 OR2T5Q6IEZ7 315 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 RETSATQ6NUM9 610 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 KDELC1Q6UW63 502 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 PAMR1Q6UXH9 720 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 C16orf62Q7Z3J2 963 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 METTL3Q86U44 580 aaKnown RBP9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 CALHM3Q86XJ0 350 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 SCUBE3Q8IX30 993 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 OR2T29Q8NH02 315 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 WDR48Q8TAF3 677 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 ANKRD49Q8WVL7 239 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 PPM1MQ96MI6 270 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 TAAR1Q96RJ0 339 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 ALG9Q9H6U8 611 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 PTPRHQ9HD43 1115 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 LYARQ9NX58 379 aaKnown RBP9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 VNN3Q9NY84 501 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 AASSQ9UDR5 926 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 KIF25Q9UIL4 384 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 A0A096LPI6 279 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 MROH6A6NGR9 719 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 SULT1B1O43704 296 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 ORC5O43913 435 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 RHOBTB1O94844 696 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 SLC2A3P11169 496 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 TSPAN8P19075 237 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 C21orf33P30042 268 aaPredicted RBP9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 CASP2P42575 452 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 BTG1P62324 171 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 POLR2GP62487 172 aaKnown RBP eCLIP9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 FKBP1AP62942 108 aaKnown RBP9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 SEMA3AQ14563 771 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 LARS2Q15031 903 aaKnown RBP9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.59□□□□□ -0.872e-6■■□□□ 13.3
HMBOX1-201ENST00000287701 EML3Q32P44 896 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 SLC25A52Q3SY17 297 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 ESRP1Q6NXG1 681 aaKnown RBP9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 MPZL3Q6UWV2 235 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 OVCH2Q7RTZ1 564 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 EFHBQ8N7U6 833 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 PTGR2Q8N8N7 351 aaPredicted RBP9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 TBL1YQ9BQ87 522 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 TNKS2Q9H2K2 1166 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 MAN2B2Q9Y2E5 1009 aa9.59□□□□□ -0.87
HMBOX1-201ENST00000287701 PCDHGA6Q9Y5G7 932 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms