RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 CSNK1G1Q9HCP0 422 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 ZNF225Q9UK10 706 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 A0A096LPI6 279 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 CLDN9O95484 217 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 CCDC159P0C7I6 412 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 BCKDHAP12694 445 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 C21orf33P30042 268 aaPredicted RBP13.06□□□□□ -0.32
SCAF4-201ENST00000286835 VEGFBP49765 207 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 VARS2Q5ST30 1063 aaKnown RBP13.06□□□□□ -0.32
SCAF4-201ENST00000286835 TPGS1Q6ZTW0 290 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
SCAF4-201ENST00000286835 GTF2H4Q92759 462 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 NELL1Q92832 810 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 MUL1Q969V5 352 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 Q96MT0 163 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 THUMPD1Q9NXG2 353 aaKnown RBP13.06□□□□□ -0.32
SCAF4-201ENST00000286835 ABCG2Q9UNQ0 655 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 SMIM30A4D0T7 59 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 H3BN98 237 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 SUV39H1O43463 412 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 MAPK1P28482 360 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 PBLDP30039 288 aaPredicted RBP13.06□□□□□ -0.32
SCAF4-201ENST00000286835 CDH12P55289 794 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 RPP38P78345 283 aaKnown RBP13.06□□□□□ -0.32
SCAF4-201ENST00000286835 GRIK2Q13002 908 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 SF3B4Q15427 424 aaKnown RBP eCLIP13.06□□□□□ -0.327e-7■■□□□ 12.3
SCAF4-201ENST00000286835 MORN1Q5T089 497 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 DEPDC1Q5TB30 811 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 MFSD4BQ5TF39 518 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 ANKS3Q6ZW76 656 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 BHLHA9Q7RTU4 235 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 B3GNT8Q7Z7M8 397 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 STARD8Q92502 1023 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 MYDGFQ969H8 173 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 EGLN2Q96KS0 407 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 MRPL17Q9NRX2 175 aaKnown RBP13.06□□□□□ -0.32
SCAF4-201ENST00000286835 TMED5Q9Y3A6 229 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 LOC285095A0A1B0GVY8 99 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 FAM92AA1XBS5 289 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 NPPAP01160 153 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 CKBP12277 381 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 TNFRSF1BP20333 461 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 OXA1LQ15070 435 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 PHKG1Q16816 387 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 PLEKHG6Q3KR16 790 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 ARMCX4Q5H9R4 360 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 PRSS55Q6UWB4 352 aaPredicted RBP13.06□□□□□ -0.32
SCAF4-201ENST00000286835 KBTBD8Q8NFY9 601 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 OR9Q1Q8NGQ5 310 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 ADAMTS16Q8TE57 1224 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 OTULINQ96BN8 352 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 HSH2DQ96JZ2 352 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 MROQ9BYG7 248 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 SNX6Q9UNH7 406 aa13.06□□□□□ -0.32
SCAF4-201ENST00000286835 MBLAC1A4D2B0 266 aaPredicted RBP13.05□□□□□ -0.32
SCAF4-201ENST00000286835 NDUFB5O43674 189 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 TSC22D2O75157 780 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 HPRP00739 348 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 OR1E2P47887 323 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 FAM171BQ6P995 826 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 SPATC1Q76KD6 591 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 RBFAQ8N0V3 343 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 MBOAT4Q96T53 435 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 BARD1Q99728 777 aaKnown RBP13.05□□□□□ -0.32
SCAF4-201ENST00000286835 ZFYVE1Q9HBF4 777 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 POPDC3Q9HBV1 291 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 RNF6Q9Y252 685 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 WBP11Q9Y2W2 641 aaKnown RBP13.05□□□□□ -0.32
SCAF4-201ENST00000286835 MYO10Q9HD67 2058 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 ZNF638Q14966 1978 aaKnown RBP13.05□□□□□ -0.32
SCAF4-201ENST00000286835 A0A1W2PQ45 241 aaPredicted RBP13.05□□□□□ -0.32
SCAF4-201ENST00000286835 A0A1W2PQY0 241 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 CENPXA8MT69 81 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 ITIH1P19827 911 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 TYMPP19971 482 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 GADD45AP24522 165 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 CD40LGP29965 261 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 ELP6Q0PNE2 266 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 SF1Q15637 639 aaKnown RBP13.05□□□□□ -0.32
SCAF4-201ENST00000286835 SPATS1Q496A3 300 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 THOC7Q6I9Y2 204 aaKnown RBP13.05□□□□□ -0.32
SCAF4-201ENST00000286835 FUT10Q6P4F1 479 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 UBE2R2Q712K3 238 aaPredicted RBP13.05□□□□□ -0.32
SCAF4-201ENST00000286835 BEND5Q7L4P6 421 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 RNF175Q8N4F7 328 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 SPATA17Q96L03 361 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 RDH12Q96NR8 316 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 VPS35Q96QK1 796 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 ITPAQ9BY32 194 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 BRINP2Q9C0B6 783 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 ERVK13-1Q9NX77 482 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 ZNF221Q9UK13 617 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 SYNDIG1LA6NDD5 238 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 TNFRSF11BO00300 401 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 CAPNS1P04632 268 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 BCL2L1Q07817 233 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 SMARCB1Q12824 385 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 IHHQ14623 411 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 HIST2H2ACQ16777 129 aaPredicted RBP13.05□□□□□ -0.32
SCAF4-201ENST00000286835 SOWAHCQ53LP3 525 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms