RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ZCCHC2Q9C0B9 1178 aaKnown RBP20.34■□□□□ 0.85
YBX3-202ENST00000279550 TRIM39Q9HCM9 518 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 TMEM45AQ9NWC5 275 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 GID8Q9NWU2 228 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 SLAMF8Q9P0V8 285 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 LEF1Q9UJU2 399 aaPredicted RBP20.34■□□□□ 0.85
YBX3-202ENST00000279550 PSMD13Q9UNM6 376 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 TRPM6Q9BX84 2022 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 IGLV3-19P01714 112 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 CATP04040 527 aaKnown RBP20.33■□□□□ 0.85
YBX3-202ENST00000279550 PCCBP05166 539 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 RPS9P46781 194 aaKnown RBP20.33■□□□□ 0.85
YBX3-202ENST00000279550 GNPDA1P46926 289 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 DGKQP52824 942 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 PPP2CBP62714 309 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 PPP2CAP67775 309 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 IMPG1Q17R60 797 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 TMEM31Q5JXX7 168 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 SLC2A7Q6PXP3 512 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 AGTRAPQ6RW13 159 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 THOC6Q86W42 341 aaKnown RBP20.33■□□□□ 0.85
YBX3-202ENST00000279550 SPATA24Q86W54 205 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 CFAP206Q8IYR0 622 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 KLK6Q92876 244 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 SGK2Q9HBY8 427 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 INTS7Q9NVH2 962 aaKnown RBP20.33■□□□□ 0.85
YBX3-202ENST00000279550 BCAP29Q9UHQ4 241 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 TMEM98Q9Y2Y6 226 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 SIT1Q9Y3P8 196 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 PCDHA9Q9Y5H5 950 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 MUC3AQ02505 3323 aa20.33■□□□□ 0.85
YBX3-202ENST00000279550 SEC22BO75396 215 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 ACADSP16219 412 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 CD22P20273 847 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 PEX2P28328 305 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 MAT2AP31153 395 aaKnown RBP20.33■□□□□ 0.84
YBX3-202ENST00000279550 ZXDAP98168 799 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 FOXM1Q08050 763 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 TRAP1Q12931 704 aaKnown RBP20.33■□□□□ 0.84
YBX3-202ENST00000279550 CHIT1Q13231 466 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 PRKG2Q13237 762 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 NAE1Q13564 534 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 PTGR1Q14914 329 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 KIAA0040Q15053 153 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 SMU1Q2TAY7 513 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 SUSD1Q6UWL2 747 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 IZUMO2Q6UXV1 221 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 ADAMTSL4Q6UY14 1074 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 KLHDC8AQ8IYD2 350 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 LIX1Q8N485 282 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 SPEM1Q8N4L4 309 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 TP53I13Q8NBR0 393 aaPredicted RBP20.33■□□□□ 0.84
YBX3-202ENST00000279550 OR2T34Q8NGX1 318 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 SELENOMQ8WWX9 145 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 TMEM125Q96AQ2 219 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 CCDC138Q96M89 665 aa20.33■□□□□ 0.84
YBX3-202ENST00000279550 MBNL1Q9NR56 388 aaKnown RBP20.33■□□□□ 0.84
YBX3-202ENST00000279550 NUMA1Q14980 2115 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 PRSS51A0A1B0GVH4 220 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 H3BM21 787 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 POP7O75817 140 aaKnown RBP20.32■□□□□ 0.84
YBX3-202ENST00000279550 C8BP07358 591 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 JAK1P23458 1154 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 IMPA1P29218 277 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 HALP42357 657 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 CASP2P42575 452 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 IRF4Q15306 451 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 RABL3Q5HYI8 236 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 FAM83HQ6ZRV2 1179 aaPredicted RBP20.32■□□□□ 0.84
YBX3-202ENST00000279550 PQLC1Q8N2U9 271 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 RNF175Q8N4F7 328 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 COX14Q96I36 57 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 RSRC1Q96IZ7 334 aaKnown RBP20.32■□□□□ 0.84
YBX3-202ENST00000279550 HIC2Q96JB3 615 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 NECAB3Q96P71 396 aaPredicted RBP20.32■□□□□ 0.84
YBX3-202ENST00000279550 OR4K3Q96R72 315 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 C1QTNF7Q9BXJ2 289 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 C1orf109Q9NX04 203 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 ASIC5Q9NY37 505 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 EIF3LQ9Y262 564 aaKnown RBP20.32■□□□□ 0.84
YBX3-202ENST00000279550 PRKAB1Q9Y478 270 aa20.32■□□□□ 0.84
YBX3-202ENST00000279550 LRRC72A6NJI9 287 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 LIN7AO14910 233 aaPredicted RBP20.31■□□□□ 0.84
YBX3-202ENST00000279550 SLC16A8O95907 504 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 DCNP07585 359 aaKnown RBP20.31■□□□□ 0.84
YBX3-202ENST00000279550 ATP6V1B2P21281 511 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 VARSP26640 1264 aaKnown RBP20.31■□□□□ 0.84
YBX3-202ENST00000279550 GTF2H3Q13889 308 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 LRRC36Q1X8D7 754 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 ZFP1Q6P2D0 407 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 CYP2R1Q6VVX0 501 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 C11orf96Q7Z7L8 435 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 TRIM69Q86WT6 500 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 HEATR4Q86WZ0 1026 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 KIAA2013Q8IYS2 634 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 LILRA2Q8N149 483 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 ZNF184Q99676 751 aaPredicted RBP20.31■□□□□ 0.84
YBX3-202ENST00000279550 ELOVL6Q9H5J4 265 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 SNX6Q9UNH7 406 aa20.31■□□□□ 0.84
YBX3-202ENST00000279550 DLGAP4Q9Y2H0 992 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms