RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 UQCC2Q9BRT2 126 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 ABHD6Q9BV23 337 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 KATNB1Q9BVA0 655 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 ZNF416Q9BWM5 594 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 NPLQ9BXD5 320 aaPredicted RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 FZD8Q9H461 694 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 RNPEPL1Q9HAU8 725 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 ASAH2Q9NR71 780 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 AGPAT3Q9NRZ7 376 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 FARSBQ9NSD9 589 aaKnown RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 PANK4Q9NVE7 773 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 FBXO28Q9NVF7 368 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 TRNAU1APQ9NX07 287 aaKnown RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 OR6C2Q9NZP2 312 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 CNOT8Q9UFF9 292 aaKnown RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 A4GNTQ9UNA3 340 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 SHOC2Q9UQ13 582 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 KCNK6Q9Y257 313 aa4.47□□□□□ -1.69
CD44-202ENST00000278385 UBE2J1Q9Y385 318 aaPredicted RBP4.47□□□□□ -1.69
CD44-202ENST00000278385 A0A1W2PN81 502 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 MAGEB17A8MXT2 336 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 RSPH10B2B2RC85 870 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 E9PLN8 166 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 GOLGA8SH3BPF8 625 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 AGPSO00116 658 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 LGALS8O00214 317 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 TEX28O15482 410 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 LRRTM2O43300 516 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 NARSO43776 548 aaKnown RBP4.46□□□□□ -1.7
CD44-202ENST00000278385 TBX19O60806 448 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 GCATO75600 419 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 SLC25A12O75746 678 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 AGTP01019 485 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 IL1BP01584 269 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 PGK2P07205 417 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 CHRM2P08172 466 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 RSPH10BP0C881 870 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 PEPDP12955 493 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 GNAZP19086 355 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 CYP2F1P24903 491 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 KLRC2P26717 231 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 RBL1P28749 1068 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 CTGFP29279 349 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 LRPAP1P30533 357 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 SHMT1P34896 483 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 PCGF2P35227 344 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 CHRNA7P36544 502 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 CLK3P49761 638 aaKnown RBP4.46□□□□□ -1.7
CD44-202ENST00000278385 GNAQP50148 359 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 PGDP52209 483 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 SMSP52788 366 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 HMGA2P52926 109 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 MTTPP55157 894 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 TAS2R40P59535 323 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 PTENP60484 403 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 LIPEQ05469 1076 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 ACSM2AQ08AH3 577 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 LAMB3Q13751 1172 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 PDE7AQ13946 482 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 PTPRCAPQ14761 206 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 VEPH1Q14D04 833 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 SLC18A3Q16572 532 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 CDO1Q16878 200 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 SLC36A3Q495N2 470 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 BCL7AQ4VC05 210 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 PDCD4Q53EL6 469 aaKnown RBP4.46□□□□□ -1.7
CD44-202ENST00000278385 ARHGEF16Q5VV41 709 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 ACSM2BQ68CK6 577 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 CCDC144NLQ6NUI1 221 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 GJB7Q6PEY0 223 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 TMEM182Q6ZP80 229 aaPredicted RBP4.46□□□□□ -1.7
CD44-202ENST00000278385 TMEM179Q6ZVK1 233 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 BIVMQ86UB2 503 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 RTN4RL2Q86UN3 420 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 LUZP1Q86V48 1076 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 SPARTQ8N0X7 666 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 Q8NA96 180 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 KBTBD3Q8NAB2 608 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 HJURPQ8NCD3 748 aaPredicted RBP4.46□□□□□ -1.7
CD44-202ENST00000278385 CPEB3Q8NE35 698 aaKnown RBP4.46□□□□□ -1.7
CD44-202ENST00000278385 GPRC5AQ8NFJ5 357 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 OR10T2Q8NGX3 314 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 SLC22A8Q8TCC7 542 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 CLEC4CQ8WTT0 213 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 SDR42E1Q8WUS8 393 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 ANKRD7Q92527 254 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 APBB2Q92870 758 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 RASD2Q96D21 266 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 MYEOVQ96EZ4 313 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 SLC46A1Q96NT5 459 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 VKORC1Q9BQB6 163 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 PINK1Q9BXM7 581 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 CDT1Q9H211 546 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 SYNDIG1Q9H7V2 258 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 MINDY3Q9H8M7 445 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 EVA1AQ9H8M9 152 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 RANGRFQ9HD47 186 aaPredicted RBP4.46□□□□□ -1.7
CD44-202ENST00000278385 SLC22A11Q9NSA0 550 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 ETNK2Q9NVF9 386 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 MRPS18AQ9NVS2 196 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms