RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ACPPP15309 386 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 NPPBP16860 134 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 TACR1P25103 407 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 NTSR1P30989 418 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 LTBRP36941 435 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 AQP4P55087 323 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 PLIN5Q00G26 463 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 RPA4Q13156 261 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 E2F2Q14209 437 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 INPP5AQ14642 412 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 MAPKAPK3Q16644 382 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 CAPN13Q6MZZ7 669 aaPredicted RBP9.29□□□□□ -0.92
TRIM55-201ENST00000276573 NOXRED1Q6NXP6 359 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 DOK6Q6PKX4 331 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 SLCO4C1Q6ZQN7 724 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 AMZ2Q86W34 360 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 CATSPER1Q8NEC5 780 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 CLHC1Q8NHS4 586 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 LRTOMTQ8WZ04 291 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 N4BP2L2Q92802 583 aaPredicted RBP9.29□□□□□ -0.92
TRIM55-201ENST00000276573 APOLD1Q96LR9 279 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 OR52E6Q96RD3 313 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 UHRF1Q96T88 793 aaPredicted RBP9.29□□□□□ -0.92
TRIM55-201ENST00000276573 EFHD1Q9BUP0 239 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 SGPP1Q9BX95 441 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 TEX101Q9BY14 249 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 BATF3Q9NR55 127 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 CCM2LQ9NUG4 571 aaPredicted RBP9.29□□□□□ -0.92
TRIM55-201ENST00000276573 ARMC1Q9NVT9 282 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 SPATA6Q9NWH7 488 aaPredicted RBP9.29□□□□□ -0.92
TRIM55-201ENST00000276573 CLDND1Q9NY35 253 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 VPS29Q9UBQ0 182 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 ZFR2Q9UPR6 939 aaKnown RBP9.29□□□□□ -0.92
TRIM55-201ENST00000276573 PCDHGA11Q9Y5H2 935 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 KCNE2Q9Y6J6 123 aa9.29□□□□□ -0.92
TRIM55-201ENST00000276573 ZNF839A8K0R7 811 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 ANHXE9PGG2 379 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 ARPC2O15144 300 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 PAK4O96013 591 aaPredicted RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 HSD3B1P14060 373 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 UQCRBP14927 111 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 SDC1P18827 310 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 HSD3B2P26439 372 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 TEAD1P28347 426 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 S100A3P33764 101 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 TRIM23P36406 574 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 CLNS1AP54105 237 aaKnown RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 PHC1P78364 1004 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 TAP2Q03519 686 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 KLC1Q07866 573 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 HTR4Q13639 388 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 BLMHQ13867 455 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 SELPLGQ14242 412 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 FGL2Q14314 439 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 FXNQ16595 210 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 SDE2Q6IQ49 451 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 KIAA1211LQ6NV74 962 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 UNC5DQ6UXZ4 953 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 LRRTM4Q86VH4 590 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 RALGPS2Q86X27 583 aaPredicted RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 RIMKLAQ8IXN7 391 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 LRRC56Q8IYG6 542 aaPredicted RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 SYTL1Q8IYJ3 562 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 ICA1LQ8NDH6 482 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 PHC3Q8NDX5 983 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 SPDYE1Q8NFV5 336 aaPredicted RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 SETD7Q8WTS6 366 aaKnown RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 NEIL2Q969S2 332 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 METTL2AQ96IZ6 378 aaKnown RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 MSLNLQ96KJ4 702 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 TSSK3Q96PN8 268 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 MTERF1Q99551 399 aaKnown RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 GABRG3Q99928 467 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 BRF2Q9HAW0 419 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 SGK2Q9HBY8 427 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 ITM2CQ9NQX7 267 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 VAPAQ9P0L0 249 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 NEUROG3Q9Y4Z2 214 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 SNX13Q9Y5W8 968 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 KMOO15229 486 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 DFNA5O60443 496 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 C1GALT1C1LP0DN25 315 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 MTHFD1P11586 935 aaKnown RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 IL10P22301 178 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 PNLIPRP1P54315 467 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 OR4D2P58180 307 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 TBPL1P62380 186 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 STARD3Q14849 445 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 AASDHQ4L235 1098 aaPredicted RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 RUNDC3AQ59EK9 446 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 TMEM196Q5HYL7 178 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 METRNLQ641Q3 311 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 PROSER1Q86XN7 944 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 OXR1Q8N573 874 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 LMNTD1Q8N9Z9 388 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 TP53I13Q8NBR0 393 aaPredicted RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 OR7G3Q8NG95 312 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 OR8J3Q8NGG0 315 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 DNAJB8Q8NHS0 232 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 GANCQ8TET4 914 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms