RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 TARM1B6A8C7 271 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 FKBP9O95302 570 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 RPS3P23396 243 aaKnown RBP eCLIP14.6□□□□□ -0.074e-11■■■□□ 17.8
SOD1-201ENST00000270142 ARNTP27540 789 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 COL8A1P27658 744 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 EIF3BP55884 814 aaKnown RBP14.6□□□□□ -0.07
SOD1-201ENST00000270142 VSX2P58304 361 aaPredicted RBP14.6□□□□□ -0.07
SOD1-201ENST00000270142 TUBB8Q3ZCM7 444 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 WASHC2DQ5SRD0 308 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 FRMPD2BQ6IN97 320 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 TTC23LQ6PF05 361 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 CNSTQ6PJW8 725 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 IGFL2Q6UWQ7 119 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 OTOAQ7RTW8 1153 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 GAS2L3Q86XJ1 694 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 SPC24Q8NBT2 197 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 GSDMBQ8TAX9 411 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 PPP4R1Q8TF05 950 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 SKA2Q8WVK7 121 aaPredicted RBP14.6□□□□□ -0.07
SOD1-201ENST00000270142 MIPEPQ99797 713 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 MRM3Q9HC36 420 aaKnown RBP14.6□□□□□ -0.07
SOD1-201ENST00000270142 EIF2B3Q9NR50 452 aaKnown RBP14.6□□□□□ -0.07
SOD1-201ENST00000270142 TSR3Q9UJK0 312 aaKnown RBP14.6□□□□□ -0.07
SOD1-201ENST00000270142 NOVA2Q9UNW9 492 aaKnown RBP14.6□□□□□ -0.07
SOD1-201ENST00000270142 SLC5A6Q9Y289 635 aa14.6□□□□□ -0.07
SOD1-201ENST00000270142 SPTBN1Q01082 2364 aaKnown RBP14.59□□□□□ -0.07
SOD1-201ENST00000270142 A0A0J9YVX5 310 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 A0A1W2PPV9 198 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 SRPX2O60687 465 aaPredicted RBP14.59□□□□□ -0.07
SOD1-201ENST00000270142 NDUFS3O75489 264 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 BASP1P80723 227 aaKnown RBP14.59□□□□□ -0.07
SOD1-201ENST00000270142 FASTKQ14296 549 aaKnown RBP14.59□□□□□ -0.07
SOD1-201ENST00000270142 RBBP7Q16576 425 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 KCTD19Q17RG1 926 aaPredicted RBP14.59□□□□□ -0.07
SOD1-201ENST00000270142 ZNF787Q6DD87 383 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 RNF44Q7L0R7 432 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 MAMDC2Q7Z304 686 aaPredicted RBP14.59□□□□□ -0.07
SOD1-201ENST00000270142 LRRC6Q86X45 466 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 PARP9Q8IXQ6 854 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 MPP5Q8N3R9 675 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 RAB42Q8N4Z0 105 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 OTUD6BQ8N6M0 293 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 OR2L3Q8NG85 312 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 HMGCLL1Q8TB92 370 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 UBE2Q2Q8WVN8 375 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 MESP1Q9BRJ9 268 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 TSGA10Q9BZW7 698 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 IL22Q9GZX6 179 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 SEMA3GQ9NS98 782 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 NXT1Q9UKK6 140 aaKnown RBP14.59□□□□□ -0.07
SOD1-201ENST00000270142 GUCA1BQ9UMX6 200 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 KLK4Q9Y5K2 254 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 FAM169AQ9Y6X4 670 aa14.59□□□□□ -0.07
SOD1-201ENST00000270142 ANKRD12Q6UB98 2062 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 LOC105369274A0A096LPK9 316 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 LOC102723532A0A0G2JNH3 316 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 HYKKA2RU49 373 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 GOLGA8KD6RF30 607 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 GOLGA8TH3BQL2 631 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 KPNA5O15131 536 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 MGAT1P26572 445 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 FMO4P31512 558 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 YBX1P67809 324 aaKnown RBP14.58□□□□□ -0.08
SOD1-201ENST00000270142 Q0VFX4 171 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 ELOAQ14241 798 aaKnown RBP14.58□□□□□ -0.08
SOD1-201ENST00000270142 CCNG2Q16589 344 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 FAM214AQ32MH5 1076 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 MEI1Q5TIA1 1274 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 AGAP7PQ5VUJ5 663 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 CES3Q6UWW8 571 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 OR4N4Q8N0Y3 316 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 OR11G2Q8NGC1 345 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 OR2A1Q8NGT9 310 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 FAM136AQ96C01 138 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 MFSD3Q96ES6 412 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 CNDP1Q96KN2 507 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 C5orf34Q96MH7 638 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 FOPNLQ96NB1 174 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 BIRC8Q96P09 236 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 AGAP4Q96P64 663 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 CRB3Q9BUF7 120 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 LHPPQ9H008 270 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 SYBUQ9NX95 663 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 IL1RAPL1Q9NZN1 696 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 BFARQ9NZS9 450 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 SPATA7Q9P0W8 599 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 STOX2Q9P2F5 926 aaPredicted RBP14.58□□□□□ -0.08
SOD1-201ENST00000270142 ZC3H7BQ9UGR2 993 aaKnown RBP14.58□□□□□ -0.08
SOD1-201ENST00000270142 MRFAP1Q9Y605 127 aa14.58□□□□□ -0.08
SOD1-201ENST00000270142 RP1L1Q8IWN7 2480 aaPredicted RBP14.57□□□□□ -0.08
SOD1-201ENST00000270142 TCRBV7S3A2A0A539 114 aa14.57□□□□□ -0.08
SOD1-201ENST00000270142 E2F3O00716 465 aa14.57□□□□□ -0.08
SOD1-201ENST00000270142 NIPSNAP2O75323 286 aa14.57□□□□□ -0.08
SOD1-201ENST00000270142 EIF2S1P05198 315 aaKnown RBP14.57□□□□□ -0.08
SOD1-201ENST00000270142 CDC25BP30305 580 aa14.57□□□□□ -0.08
SOD1-201ENST00000270142 CCNFP41002 786 aa14.57□□□□□ -0.08
SOD1-201ENST00000270142 NPY2RP49146 381 aa14.57□□□□□ -0.08
SOD1-201ENST00000270142 KLC1Q07866 573 aa14.57□□□□□ -0.08
SOD1-201ENST00000270142 GBX1Q14549 363 aa14.57□□□□□ -0.08
SOD1-201ENST00000270142 RPS6KA1Q15418 735 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms