RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 ANO7Q6IWH7 933 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 DOK6Q6PKX4 331 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 TICAM1Q8IUC6 712 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 AQP12AQ8IXF9 295 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 OXR1Q8N573 874 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 OR9A1PQ8NGU1 263 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 CLHC1Q8NHS4 586 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 UHRF1Q96T88 793 aaPredicted RBP16.11■□□□□ 0.17
CCDC40-201ENST00000269318 CGREF1Q99674 301 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 SGPP1Q9BX95 441 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 MKRN2Q9H000 416 aaKnown RBP16.11■□□□□ 0.17
CCDC40-201ENST00000269318 MUC13Q9H3R2 512 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 SPATA6Q9NWH7 488 aaPredicted RBP16.11■□□□□ 0.17
CCDC40-201ENST00000269318 SLC23A2Q9UGH3 650 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 CLGNO14967 610 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 STAMBPO95630 424 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 TACR1P25103 407 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 TEAD1P28347 426 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 GRIA3P42263 894 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 AQP4P55087 323 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 TBPL1P62380 186 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 RPA4Q13156 261 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 TMEM196Q5HYL7 178 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 UNC5DQ6UXZ4 953 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 SLCO4C1Q6ZQN7 724 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 AMZ2Q86W34 360 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 TP53I13Q8NBR0 393 aaPredicted RBP16.11■□□□□ 0.17
CCDC40-201ENST00000269318 SPDYE1Q8NFV5 336 aaPredicted RBP16.11■□□□□ 0.17
CCDC40-201ENST00000269318 CSGALNACT1Q8TDX6 532 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 NEIL2Q969S2 332 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 PPM1MQ96MI6 270 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 HHIPQ96QV1 700 aa16.11■□□□□ 0.17
CCDC40-201ENST00000269318 ARPC2O15144 300 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 PCSK2P16519 638 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 MAPK1P28482 360 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 NTSR1P30989 418 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 CTHP32929 405 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 TRIM23P36406 574 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 SELPLGQ14242 412 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 IRF4Q15306 451 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 CAPN13Q6MZZ7 669 aaPredicted RBP16.1■□□□□ 0.17
CCDC40-201ENST00000269318 EP400NLQ6ZTU2 488 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 PDZD3Q86UT5 571 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 LRRTM4Q86VH4 590 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 SYTL1Q8IYJ3 562 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 FAM9CQ8IZT9 166 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 GOLM1Q8NBJ4 401 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 WDR34Q96EX3 536 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 APOLD1Q96LR9 279 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 KCTD14Q9BQ13 255 aaPredicted RBP16.1■□□□□ 0.17
CCDC40-201ENST00000269318 TRIM15Q9C019 465 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 ITM2CQ9NQX7 267 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 VAPAQ9P0L0 249 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 KCNE2Q9Y6J6 123 aa16.1■□□□□ 0.17
CCDC40-201ENST00000269318 ZNF839A8K0R7 811 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 ADAM23O75077 832 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 KCNH1O95259 989 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 NPPBP16860 134 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 HTR1EP28566 365 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 PHC1P78364 1004 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 TAP2Q03519 686 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 INPP5AQ14642 412 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 MAPKAPK3Q16644 382 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 GRAMD1BQ3KR37 738 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 NOXRED1Q6NXP6 359 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 IRGCQ6NXR0 463 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 SPPL2CQ8IUH8 684 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 RIMKLAQ8IXN7 391 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 TDHQ8IZJ6 230 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 ADCY4Q8NFM4 1077 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 OR8J3Q8NGG0 315 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 TESCQ96BS2 214 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 C11orf24Q96F05 449 aaPredicted RBP16.09■□□□□ 0.17
CCDC40-201ENST00000269318 TM7SF3Q9NS93 570 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 ARMC1Q9NVT9 282 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 LMCD1Q9NZU5 365 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 DTNAQ9Y4J8 743 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 SNX13Q9Y5W8 968 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 TRPM6Q9BX84 2022 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 A0A1W2PQF6 199 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 HSD3B1P14060 373 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 HSD3B2P26439 372 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 CLNS1AP54105 237 aaKnown RBP16.09■□□□□ 0.17
CCDC40-201ENST00000269318 ADNP2Q6IQ32 1131 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 IFNEQ86WN2 208 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 MSRB3Q8IXL7 192 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 IL17RCQ8NAC3 791 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 SMRP1Q8NCR6 262 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 OR7G3Q8NG95 312 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 CANT1Q8WVQ1 401 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 N4BP2L2Q92802 583 aaPredicted RBP16.09■□□□□ 0.17
CCDC40-201ENST00000269318 TSSK3Q96PN8 268 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 MTERF1Q99551 399 aaKnown RBP16.09■□□□□ 0.17
CCDC40-201ENST00000269318 C1QTNF2Q9BXJ5 285 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 BRF2Q9HAW0 419 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 SGK2Q9HBY8 427 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 CCM2LQ9NUG4 571 aaPredicted RBP16.09■□□□□ 0.17
CCDC40-201ENST00000269318 FBXL12Q9NXK8 326 aa16.09■□□□□ 0.17
CCDC40-201ENST00000269318 VPS29Q9UBQ0 182 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms