RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 MYCLP1P12525 358 aaPredicted RBP12.54□□□□□ -0.4
CPSF6-201ENST00000266679 TYRP14679 529 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 VIPR1P32241 457 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 RECQLP46063 649 aaPredicted RBP12.54□□□□□ -0.4
CPSF6-201ENST00000266679 ERVK-21P61565 698 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 POM121L1PQ3SYA9 428 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 ZBED5Q49AG3 693 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 PLEKHS1Q5SXH7 462 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 PRAMEF9Q5VWM5 478 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 CHST15Q7LFX5 561 aaPredicted RBP12.54□□□□□ -0.4
CPSF6-201ENST00000266679 CYP2U1Q7Z449 544 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 ALDH16A1Q8IZ83 802 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 HS3ST5Q8IZT8 346 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 TMEM132CQ8N3T6 1108 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 OR2A12Q8NGT7 310 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 CMTM7Q96FZ5 175 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 ITCHQ96J02 903 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 APOLD1Q96LR9 279 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 MUS81Q96NY9 551 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 PHF12Q96QT6 1004 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 KAT8Q9H7Z6 458 aaKnown RBP12.54□□□□□ -0.4
CPSF6-201ENST00000266679 SERHLQ9NQF3 203 aa12.54□□□□□ -0.4
CPSF6-201ENST00000266679 HEMK1Q9Y5R4 338 aaPredicted RBP12.54□□□□□ -0.4
CPSF6-201ENST00000266679 TRIM64A6NGJ6 449 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 OR2AG2A6NM03 316 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 C16orf96A6NNT2 1141 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 G3V2T6 193 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 H0YAE9 185 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 GNGT2O14610 69 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 ERN1O75460 977 aaKnown RBP12.53□□□□□ -0.4
CPSF6-201ENST00000266679 CREG1O75629 220 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 SERPINA1P01009 418 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 PRPS2P11908 318 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 ELK4P28324 431 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 ETV3P41162 512 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 HNMTP50135 292 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 PPP1R8Q12972 351 aaKnown RBP12.53□□□□□ -0.4
CPSF6-201ENST00000266679 SP140Q13342 867 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 PON2Q15165 354 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 ATG9BQ674R7 924 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 ANKRD34AQ69YU3 496 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 TTC23LQ6PF05 361 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 ERI1Q8IV48 349 aaKnown RBP12.53□□□□□ -0.4
CPSF6-201ENST00000266679 NAT16Q8N8M0 369 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 L3MBTL4Q8NA19 623 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 KLHL23Q8NBE8 558 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 LEMD2Q8NC56 503 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 ISOC1Q96CN7 298 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 EGLN2Q96KS0 407 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 KCNH6Q9H252 994 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 LINC00597Q9H2U6 94 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 TOR3AQ9H497 397 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 FAM83DQ9H4H8 585 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 RMND5AQ9H871 391 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 POLR1BQ9H9Y6 1135 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 DNAJB9Q9UBS3 223 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 CIDEBQ9UHD4 219 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 CFAP99D6REC4 459 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 NOBOXO60393 691 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 LEFTY1O75610 366 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 CYP2A6P11509 494 aaPredicted RBP12.53□□□□□ -0.4
CPSF6-201ENST00000266679 MAPK1P28482 360 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 NRIP1P48552 1158 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 POLR2LP62875 67 aaKnown RBP12.53□□□□□ -0.4
CPSF6-201ENST00000266679 CTBSQ01459 385 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 CHIT1Q13231 466 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 PMS2P3Q13401 168 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 CCNYL2Q5T2Q4 361 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 LRIF1Q5T3J3 769 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 PLPP4Q5VZY2 271 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 OR4F3Q6IEY1 312 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 Q6ZVL8 140 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 GPR149Q86SP6 731 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 ADIPOR2Q86V24 386 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 CALHM3Q86XJ0 350 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 ZDHHC13Q8IUH4 622 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 PLPP6Q8IY26 295 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 OR10Q1Q8NGQ4 319 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 CDC26Q8NHZ8 85 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 SP7Q8TDD2 431 aaPredicted RBP12.53□□□□□ -0.4
CPSF6-201ENST00000266679 MCOLN3Q8TDD5 553 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 IRF7Q92985 503 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 MTG2Q9H4K7 406 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 PCDH12Q9NPG4 1184 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 IFT80Q9P2H3 777 aaPredicted RBP12.53□□□□□ -0.4
CPSF6-201ENST00000266679 CDC14AQ9UNH5 594 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 ERVW-1Q9UQF0 538 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 MAN2B2Q9Y2E5 1009 aa12.53□□□□□ -0.4
CPSF6-201ENST00000266679 MTCL1Q9Y4B5 1905 aaKnown RBP12.52□□□□□ -0.41
CPSF6-201ENST00000266679 CXorf51AA0A1B0GTR3 108 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 CARNS1A5YM72 827 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 TMEM202A6NGA9 273 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 TTC34A8MYJ7 566 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 GFYI3L273 518 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 SLC16A5O15375 505 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 SGTAO43765 313 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 RFPL2O75678 378 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 HPRP00739 348 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 AMD1P17707 334 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 GZMMP51124 257 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms