RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 TLCD2A6NGC4 264 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 GOLGA6L10A6NI86 522 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 TMX2-CTNND1H3BSU7 103 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 UBXN8O00124 270 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 TK2O00142 265 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 TM9SF1O15321 606 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 CAPN5O15484 640 aaPredicted RBP13.77□□□□□ -0.21
SSBP1-201ENST00000265304 SYF2O95926 243 aaKnown RBP13.77□□□□□ -0.21
SSBP1-201ENST00000265304 THRAP10827 490 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 UGT2B7P16662 529 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 HRH2P25021 359 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 DNAJB13P59910 316 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 PRKAA1Q13131 559 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 NAE1Q13564 534 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 MPP2Q14168 576 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 PTCHD3Q3KNS1 767 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 SPESP1Q6UW49 350 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 USP53Q70EK8 1073 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 FRA10AC1Q70Z53 315 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 RAB44Q7Z6P3 723 aaPredicted RBP13.77□□□□□ -0.21
SSBP1-201ENST00000265304 TMPRSS12Q86WS5 348 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 SYTL1Q8IYJ3 562 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 ABHD11Q8NFV4 315 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 OR4K1Q8NGD4 311 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 NCSTNQ92542 709 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 ZUFSPQ96AP4 578 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 CCDC126Q96EE4 140 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 SLC41A2Q96JW4 573 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 ATP6V1G3Q96LB4 118 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 OR4K3Q96R72 315 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 RUFY1Q96T51 708 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 MIPEPQ99797 713 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 TMEM79Q9BSE2 394 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 SARGQ9BW04 601 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 CD244Q9BZW8 370 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 UTP6Q9NYH9 597 aaKnown RBP13.77□□□□□ -0.21
SSBP1-201ENST00000265304 BTRCQ9Y297 605 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 PCDHB11Q9Y5F2 797 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 TNPO3Q9Y5L0 923 aaKnown RBP13.77□□□□□ -0.21
SSBP1-201ENST00000265304 NCOR2Q9Y618 2525 aa13.77□□□□□ -0.21
SSBP1-201ENST00000265304 HGSO14964 777 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-201ENST00000265304 DLX3O60479 287 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 STK16O75716 305 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 GUCA1CO95843 209 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 POLR2CP19387 275 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-201ENST00000265304 ATP5F1P24539 256 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-201ENST00000265304 CASP2P42575 452 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 LSSP48449 732 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 PRKAA2P54646 552 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 NAA20P61599 178 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 TBPL1P62380 186 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 SPIDRQ14159 915 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 ICE2Q659A1 982 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 ZNF425Q6IV72 752 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 CAPN13Q6MZZ7 669 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-201ENST00000265304 C16orf46Q6P387 395 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 ZYG11AQ6WRX3 759 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 RBM44Q6ZP01 1051 aaKnown RBP13.76□□□□□ -0.21
SSBP1-201ENST00000265304 OR2L3Q8NG85 312 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 OR6Y1Q8NGX8 325 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 TCP10LQ8TDR4 215 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 JPH3Q8WXH2 748 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-201ENST00000265304 WDR34Q96EX3 536 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 AHCYL2Q96HN2 611 aaKnown RBP13.76□□□□□ -0.21
SSBP1-201ENST00000265304 TMEM74Q96NL1 305 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 HAUS8Q9BT25 410 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 CAPS2Q9BXY5 557 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 SEMA6CQ9H3T2 930 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 CCDC177Q9NQR7 707 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-201ENST00000265304 GPRC5BQ9NZH0 403 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 CD274Q9NZQ7 290 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 ANKMY1Q9P2S6 941 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 COPG2Q9UBF2 871 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 CIDEBQ9UHD4 219 aa13.76□□□□□ -0.21
SSBP1-201ENST00000265304 IGKV1-8A0A0C4DH67 115 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 A0A0J9YY10 115 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 DCDC2BA2VCK2 349 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 A8MT66 165 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 HMGB1P1B2RPK0 211 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-201ENST00000265304 MT-CO3P00414 261 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 RPS17P08708 135 aaKnown RBP13.75□□□□□ -0.21
SSBP1-201ENST00000265304 EPORP19235 508 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 TAC1P20366 129 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 IMPDH1P20839 514 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 RPA3P35244 121 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-201ENST00000265304 GFERP55789 205 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 PPP1CAP62136 330 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 NAA25Q14CX7 972 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 PFKFB4Q16877 469 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 ISXQ2M1V0 245 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 AMZ1Q400G9 498 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 TTMPQ5BVD1 217 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 TMPRSS7Q7RTY8 843 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 LRRC70Q7Z2Q7 622 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 SLC22A9Q8IVM8 553 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 FBXO39Q8N4B4 442 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 L3HYPDHQ96EM0 354 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 LIN37Q96GY3 246 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-201ENST00000265304 TRAPPC9Q96Q05 1148 aa13.75□□□□□ -0.21
SSBP1-201ENST00000265304 ATG10Q9H0Y0 220 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms