RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 EPYCQ99645 322 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 AASDHPPTQ9NRN7 309 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 MAU2Q9Y6X3 613 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 PRPS2P11908 318 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 LPOP22079 712 aaPredicted RBP12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 IGFBP6P24592 240 aaPredicted RBP12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 RGS6P49758 472 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 ITGA1P56199 1179 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 CLDN8P56748 225 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 LAPTM4AQ15012 233 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 GTDC1Q4AE62 458 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 MS4A13Q5J8X5 152 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 PRSS36Q5K4E3 855 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 ARMC4Q5T2S8 1044 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 SPATC1Q76KD6 591 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 ZNF367Q7RTV3 350 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 KRTCAP2Q8N6L1 136 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 ST6GAL2Q96JF0 529 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 TRIB3Q96RU7 358 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 PHOX2BQ99453 314 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 RTP3Q9BQQ7 232 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 ITM2CQ9NQX7 267 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 FKBP14Q9NWM8 211 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 THUMPD1Q9NXG2 353 aaKnown RBP12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 TRPS1Q9UHF7 1281 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 PCDHGA6Q9Y5G7 932 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 FZD9O00144 591 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 FFAR2O15552 330 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 GLUD1P00367 558 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 GGT2P36268 569 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 MAPKAPK2P49137 400 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 C19orf57Q0VDD7 668 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 LRRC26Q2I0M4 334 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 TIGD5Q53EQ6 642 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 USP39Q53GS9 565 aaKnown RBP12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 FAM209AQ5JX71 171 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 ALG1LQ6GMV1 187 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 EIF3MQ7L2H7 374 aaKnown RBP12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 MON1AQ86VX9 555 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 SPATA2LQ8IUW3 424 aaPredicted RBP12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 CCDC71Q8IV32 467 aaPredicted RBP12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 NLGN4XQ8N0W4 816 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 PSD4Q8NDX1 1056 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 ZFP14Q9HCL3 533 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 DIABLOQ9NR28 239 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 QPCTLQ9NXS2 382 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 ZNF490Q9ULM2 529 aaPredicted RBP12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 DHRS7Q9Y394 339 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 AP1M2Q9Y6Q5 423 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 A0A1W2PQH9 124 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 SEMG1P04279 462 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 EBLN1P0CF75 366 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 SMPD1P17405 629 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 MAPK1P28482 360 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 MZF1P28698 734 aaPredicted RBP12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 RRM2P31350 389 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 PXNP49023 591 aaPredicted RBP12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 RPS14P62263 151 aaKnown RBP12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 BCL7AQ4VC05 210 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 ALFQ53S48 1182 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 CTSL3PQ5NE16 218 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 VN1R5Q7Z5H4 357 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 ZNF605Q86T29 641 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 TRPM4Q8TD43 1214 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 GTF3C2Q8WUA4 911 aaPredicted RBP12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 GGHQ92820 318 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 CHCHD6Q9BRQ6 235 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 SLC29A3Q9BZD2 475 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 SARS2Q9NP81 518 aaKnown RBP12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 PCDHB1Q9Y5F3 818 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 PCDHGB3Q9Y5G1 929 aa12.06□□□□□ -0.48
CHMP2B-201ENST00000263780 DRGXA6NNA5 263 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 hCG_2039718K7EN88 272 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 RFXANKO14593 260 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 TNFRSF10BO14763 440 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 TLL1O43897 1013 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 BCKDHAP12694 445 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 PTX3P26022 381 aaPredicted RBP12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 C21orf33P30042 268 aaPredicted RBP12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 KDELR2P33947 212 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 RGS4P49798 205 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 LIMK1P53667 647 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 VMACQ2NL98 169 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 FAM171A1Q5VUB5 890 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 DOK6Q6PKX4 331 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 SAPCD2Q86UD0 394 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 ZZZ3Q8IYH5 903 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 DENND6BQ8NEG7 585 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 SUN5Q8TC36 379 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 ULK4Q96C45 1275 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 PKMYT1Q99640 499 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 GON7Q9BXV9 100 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 KATNBL1Q9H079 304 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 OR51E2Q9H255 320 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 ELP3Q9H9T3 547 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 SERHLQ9NQF3 203 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 RPRD1BQ9NQG5 326 aaKnown RBP12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 SNX6Q9UNH7 406 aa12.05□□□□□ -0.48
CHMP2B-201ENST00000263780 TMA7Q9Y2S6 64 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms