RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 KMOO15229 486 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 KATNA1O75449 491 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 C1orf105O95561 183 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 CEACAM5P06731 702 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 CAPN1P07384 714 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 LINC00032P0C843 101 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 CD1EP15812 388 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 EPB42P16452 691 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 CPA2P48052 419 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 HTR6P50406 440 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 NOVA1P51513 510 aaKnown RBP16.94■□□□□ 0.3
SRSF1-201ENST00000258962 CCNG1P51959 295 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 THOP1P52888 689 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 NAA25Q14CX7 972 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 XKR7Q5GH72 579 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 RINLQ6ZS11 566 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 DDIASQ8IXT1 998 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 KLHDC8AQ8IYD2 350 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 PYCR2Q96C36 320 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 CCDC138Q96M89 665 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 FOPNLQ96NB1 174 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 PKP4Q99569 1192 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 NTMT1Q9BV86 223 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 ATG10Q9H0Y0 220 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 AKTIPQ9H8T0 292 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 STOX2Q9P2F5 926 aaPredicted RBP16.94■□□□□ 0.3
SRSF1-201ENST00000258962 GIMAP2Q9UG22 337 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 CIDEBQ9UHD4 219 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 POLG2Q9UHN1 485 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 SLC17A4Q9Y2C5 497 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 COPG1Q9Y678 874 aaKnown RBP16.94■□□□□ 0.3
SRSF1-201ENST00000258962 LAMA1P25391 3075 aa16.94■□□□□ 0.3
SRSF1-201ENST00000258962 SH3BP5O60239 455 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 PCDHGA12O60330 932 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 WDR47O94967 919 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 KCNK5O95279 499 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 CEACAM1P13688 526 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 PIK3R1P27986 724 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 PTPN4P29074 926 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 PIK3CGP48736 1102 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 PFN3P60673 137 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 YPEL5P62699 121 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 RPA4Q13156 261 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 PTK2BQ14289 1009 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 INAVAQ3KP66 663 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 EFL1Q7Z2Z2 1120 aaKnown RBP16.93■□□□□ 0.3
SRSF1-201ENST00000258962 MILR1Q7Z6M3 343 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 PIP4P1Q86T03 277 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 PDZD3Q86UT5 571 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 DEFB124Q8NES8 71 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 SPDYE1Q8NFV5 336 aaPredicted RBP16.93■□□□□ 0.3
SRSF1-201ENST00000258962 ATP6V1E2Q96A05 226 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 ZNHIT2Q9UHR6 403 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 LRP4O75096 1905 aa16.93■□□□□ 0.3
SRSF1-201ENST00000258962 FLRT2O43155 660 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 CHEK2O96017 543 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 EBLN1P0CF75 366 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 PRR35P0CG20 571 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 HGFP14210 728 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 NQO1P15559 274 aaKnown RBP16.92■□□□□ 0.3
SRSF1-201ENST00000258962 IMPA1P29218 277 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 ARL1P40616 181 aaPredicted RBP16.92■□□□□ 0.3
SRSF1-201ENST00000258962 RXRGP48443 463 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 MNAT1P51948 309 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 DMPKQ09013 629 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 GRB7Q14451 532 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 METRNLQ641Q3 311 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 SCIMPQ6UWF3 145 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 ERMP1Q7Z2K6 904 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 NAXDQ8IW45 347 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 POU5F2Q8N7G0 328 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 OR2T11Q8NH01 316 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 FBXO27Q8NI29 283 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 METTL6Q8TCB7 284 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 MIPEPQ99797 713 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 TRPS1Q9UHF7 1281 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 RNF11Q9Y3C5 154 aa16.92■□□□□ 0.3
SRSF1-201ENST00000258962 SPTY2D1-AS1A0A0U1RR47 76 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 SLC22A2O15244 555 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 PRAMEF4O60810 478 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 SLC16A8O95907 504 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 HOXC4P09017 264 aaPredicted RBP16.91■□□□□ 0.3
SRSF1-201ENST00000258962 ALDOCP09972 364 aaKnown RBP16.91■□□□□ 0.3
SRSF1-201ENST00000258962 PRDX6P30041 224 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 GRK6P43250 576 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 KIAA1024LP59773 190 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 PRAMEF9Q5VWM5 478 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 AGTRAPQ6RW13 159 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 UNC5DQ6UXZ4 953 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 SLC22A18ASQ8N1D0 253 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 CHCHD4Q8N4Q1 142 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 SNX31Q8N9S9 440 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 HMGCLL1Q8TB92 370 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 RHBDD1Q8TEB9 315 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 UTP4Q969X6 686 aaKnown RBP16.91■□□□□ 0.3
SRSF1-201ENST00000258962 TIMM29Q9BSF4 260 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 RMI1Q9H9A7 625 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 FGF22Q9HCT0 170 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 MRPL40Q9NQ50 206 aaKnown RBP16.91■□□□□ 0.3
SRSF1-201ENST00000258962 DNAJC11Q9NVH1 559 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms