RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 BBS1Q8NFJ9 593 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 MASTLQ96GX5 879 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 OXNAD1Q96HP4 312 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF597Q96LX8 424 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 GAL3ST4Q96RP7 486 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 SLC6A16Q9GZN6 736 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 NMUR2Q9GZQ4 415 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 CCDC90BQ9GZT6 254 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ITM2CQ9NQX7 267 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 SIRT7Q9NRC8 400 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 FAM120CQ9NX05 1096 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 FBXL12Q9NXK8 326 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 MYH3P11055 1940 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TMEM2Q9UHN6 1383 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 C7orf72A4D263 438 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 E9PAM4 449 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 PHGDHO43175 533 aaKnown RBP7.56□□□□□ -1.2
GPNMB-201ENST00000258733 CNTN5O94779 1100 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 VAMP5O95183 116 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 C1QBP02746 253 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TRIM49P0CI25 452 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TRIM49CP0CI26 452 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 MYL2P10916 166 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TPH1P17752 444 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 CA4P22748 312 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 ITGA6P23229 1130 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TGFBR2P37173 567 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 SLC1A6P48664 564 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 NAGLUP54802 743 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 DCAF7P61962 342 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TNFRSF9Q07011 255 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 EHHADHQ08426 723 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 ANGPT1Q15389 498 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 NRF1Q16656 503 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 MICAQ29983 383 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 MGAT5BQ3V5L5 792 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TTC38Q5R3I4 469 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 RAP1GAP2Q684P5 730 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 SMYD5Q6GMV2 418 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 LAMTOR1Q6IAA8 161 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TIGD7Q6NT04 549 aaPredicted RBP7.56□□□□□ -1.2
GPNMB-201ENST00000258733 SHC4Q6S5L8 630 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 DLEU7Q6UYE1 221 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 BRINP3Q76B58 766 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 LRRC8DQ7L1W4 858 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 SMIM15Q7Z3B0 74 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 SH3RF1Q7Z6J0 888 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TFAP2DQ7Z6R9 452 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 LHFPL4Q7Z7J7 247 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 PRPF39Q86UA1 669 aaKnown RBP7.56□□□□□ -1.2
GPNMB-201ENST00000258733 THOC6Q86W42 341 aaKnown RBP7.56□□□□□ -1.2
GPNMB-201ENST00000258733 PPP1R3BQ86XI6 285 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 ENTHD1Q8IYW4 607 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 SVOPQ8N4V2 548 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 NUDT10Q8NFP7 164 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 FBXO25Q8TCJ0 367 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 GCDHQ92947 438 aaPredicted RBP7.56□□□□□ -1.2
GPNMB-201ENST00000258733 MYO19Q96H55 970 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 UBXN10Q96LJ8 280 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 DCLRE1CQ96SD1 692 aaKnown RBP7.56□□□□□ -1.2
GPNMB-201ENST00000258733 C1QTNF3Q9BXJ4 246 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 DERL2Q9GZP9 239 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TOLLIPQ9H0E2 274 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 MIR1-1HGQ9H1L0 117 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 FOXP1Q9H334 677 aaPredicted RBP7.56□□□□□ -1.2
GPNMB-201ENST00000258733 SLAMF7Q9NQ25 335 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 AGPAT5Q9NUQ2 364 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TBC1D13Q9NVG8 400 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 ANAPC2Q9UJX6 822 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 ERVW-1Q9UQF0 538 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 CNTNAP1P78357 1384 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 A0A1W2PPL8 197 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 FAM74A7A6NL05 159 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TLR5O60602 858 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 SEC14L2O76054 403 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 SOX30O94993 753 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 IL1AP01583 271 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 MPOP05164 745 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 CDKN2CP42773 168 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 GPR4P46093 362 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 CCT4P50991 539 aaKnown RBP7.56□□□□□ -1.2
GPNMB-201ENST00000258733 KIAA1024LP59773 190 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 CSTF1Q05048 431 aaKnown RBP7.56□□□□□ -1.2
GPNMB-201ENST00000258733 GPR17Q13304 367 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 AQP6Q13520 282 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 GPR50Q13585 617 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 MPPED2Q15777 294 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 KCTD19Q17RG1 926 aaPredicted RBP7.56□□□□□ -1.2
GPNMB-201ENST00000258733 FAM74A3Q4VXF1 159 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 FAM69AQ5T7M9 428 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 FBXO31Q5XUX0 539 aaPredicted RBP7.56□□□□□ -1.2
GPNMB-201ENST00000258733 KLHL24Q6TFL4 600 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 SPESP1Q6UW49 350 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TMEM108Q6UXF1 575 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 RAB43Q86YS6 212 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 GID4Q8IVV7 300 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 MYCT1Q8N699 235 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 BPIFB6Q8NFQ5 453 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 OR10A7Q8NGE5 316 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 EMID1Q96A84 441 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms