RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ASPDHA6ND91 283 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 ZNF860A6NHJ4 632 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 WNT9AO14904 365 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 PRAMEF4O60810 478 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 ETHE1O95571 254 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 CLPTM1O96005 669 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 PGRP06401 933 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 RPS17P08708 135 aaKnown RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 UQCRBP14927 111 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 FSHRP23945 695 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 MAPK9P45984 424 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 DNAJB13P59910 316 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 ERVK-8P63133 956 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 SLC14A1Q13336 389 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 DOC2AQ14183 400 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 PRAMEF9Q5VWM5 478 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 KANK2Q63ZY3 851 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 PRR23CQ6ZRP0 262 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 ZC3H7AQ8IWR0 971 aaKnown RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 ASZ1Q8WWH4 475 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 NEIL2Q969S2 332 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 FOPNLQ96NB1 174 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 TCF12Q99081 682 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 PLA2G2FQ9BZM2 168 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 REXO4Q9GZR2 422 aaKnown RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 MCOLN1Q9GZU1 580 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 KCTD5Q9NXV2 234 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 KLHL3Q9UH77 587 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 SORCS3Q9UPU3 1222 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 MANBAO00462 879 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 RGS14O43566 566 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 HOXB3P14651 431 aaPredicted RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 ACADSP16219 412 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 IL7RP16871 459 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 CYP2A7P20853 494 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 AK4P27144 223 aaPredicted RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 ID2Q02363 134 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 HSPB3Q12988 150 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 C1orf61Q13536 156 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 TNFAIP8L2Q6P589 184 aaPredicted RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 LILRA6Q6PI73 481 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 LIPIQ6XZB0 460 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 RBM44Q6ZP01 1051 aaKnown RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 DTWD1Q8N5C7 304 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 SLC13A3Q8WWT9 602 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 RAB8BQ92930 207 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 EXOSC8Q96B26 276 aaKnown RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 ARRDC3Q96B67 414 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 TRMT2BQ96GJ1 504 aaKnown RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 ABCG4Q9H172 646 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 SPNS1Q9H2V7 528 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 EPS8L2Q9H6S3 715 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 IRAK4Q9NWZ3 460 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 PATJQ8NI35 1801 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 FXYD1O00168 92 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 FZD6O60353 706 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 PRAMEF10O60809 474 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 KLK1P06870 262 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 ANXA4P09525 319 aaPredicted RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 ALOX15P16050 662 aaPredicted RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 DDX5P17844 614 aaKnown RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 FASP25445 335 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 ELK4P28324 431 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 GRIA2P42262 883 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 ST13P50502 369 aaKnown RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 RAB8AP61006 207 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 SLBPQ14493 270 aaKnown RBP eCLIP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 KLHDC10Q6PID8 442 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 THOC6Q86W42 341 aaKnown RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 PDSS2Q86YH6 399 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 PSD4Q8NDX1 1056 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 OR2T34Q8NGX1 318 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 OR2T3Q8NH03 318 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 CXorf40AQ8TE69 158 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 PPP2R3CQ969Q6 453 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 CIDECQ96AQ7 238 aaPredicted RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 TRIM4Q9C037 500 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 RIBC2Q9H4K1 309 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 SLC23A2Q9UGH3 650 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 BTBD3Q9Y2F9 522 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.84□□□□□ -0.99
CKAP2-201ENST00000258607 GPR45Q9Y5Y3 372 aa8.84□□□□□ -0.99
CKAP2-201ENST00000258607 MAGEA13PA6NCF6 341 aa8.83□□□□□ -1
CKAP2-201ENST00000258607 CLOCKO15516 846 aa8.83□□□□□ -1
CKAP2-201ENST00000258607 NARSO43776 548 aaKnown RBP8.83□□□□□ -1
CKAP2-201ENST00000258607 GMFGO60234 142 aa8.83□□□□□ -1
CKAP2-201ENST00000258607 MITFO75030 526 aaPredicted RBP8.83□□□□□ -1
CKAP2-201ENST00000258607 SERPINA1P01009 418 aa8.83□□□□□ -1
CKAP2-201ENST00000258607 CST1P01037 141 aa8.83□□□□□ -1
CKAP2-201ENST00000258607 LAMP1P11279 417 aa8.83□□□□□ -1
CKAP2-201ENST00000258607 BIRC2Q13490 618 aa8.83□□□□□ -1
CKAP2-201ENST00000258607 GANABQ14697 944 aaKnown RBP8.83□□□□□ -1
CKAP2-201ENST00000258607 KIAA1211LQ6NV74 962 aa8.83□□□□□ -1
CKAP2-201ENST00000258607 BLOC1S3Q6QNY0 202 aa8.83□□□□□ -1
CKAP2-201ENST00000258607 TBPL2Q6SJ96 375 aa8.83□□□□□ -1
CKAP2-201ENST00000258607 CERS6Q6ZMG9 384 aa8.83□□□□□ -1
CKAP2-201ENST00000258607 Q6ZPB1 254 aaPredicted RBP8.83□□□□□ -1
CKAP2-201ENST00000258607 KCT2Q8NC54 265 aa8.83□□□□□ -1
CKAP2-201ENST00000258607 HMGB4Q8WW32 186 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms