RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 APOBEC3FQ8IUX4 373 aaKnown RBP11.22□□□□□ -0.61
TROAP-201ENST00000257909 ELMOD2Q8IZ81 293 aa11.22□□□□□ -0.61
TROAP-201ENST00000257909 OR10Q1Q8NGQ4 319 aa11.22□□□□□ -0.61
TROAP-201ENST00000257909 LINGO1Q96FE5 620 aa11.22□□□□□ -0.61
TROAP-201ENST00000257909 CRELD1Q96HD1 420 aa11.22□□□□□ -0.61
TROAP-201ENST00000257909 C1orf74Q96LT6 269 aa11.22□□□□□ -0.61
TROAP-201ENST00000257909 CHCHD6Q9BRQ6 235 aa11.22□□□□□ -0.61
TROAP-201ENST00000257909 REEP1Q9H902 201 aa11.22□□□□□ -0.61
TROAP-201ENST00000257909 PLSCR3Q9NRY6 295 aa11.22□□□□□ -0.61
TROAP-201ENST00000257909 OLA1Q9NTK5 396 aaKnown RBP11.22□□□□□ -0.61
TROAP-201ENST00000257909 ASIC5Q9NY37 505 aa11.22□□□□□ -0.61
TROAP-201ENST00000257909 RPS6KA6Q9UK32 745 aa11.22□□□□□ -0.61
TROAP-201ENST00000257909 PCDHGA6Q9Y5G7 932 aa11.22□□□□□ -0.61
TROAP-201ENST00000257909 OR7A17O14581 309 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 TPPPO94811 219 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 CNPP09543 421 aaKnown RBP11.21□□□□□ -0.61
TROAP-201ENST00000257909 CD72P21854 359 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 PCSK1P29120 753 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 PKLRP30613 574 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 MLLT6P55198 1093 aaPredicted RBP11.21□□□□□ -0.61
TROAP-201ENST00000257909 GTF2H2Q13888 395 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 GALNT3Q14435 633 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 NFE2Q16621 373 aaPredicted RBP11.21□□□□□ -0.61
TROAP-201ENST00000257909 PTPRNQ16849 979 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 GTF2H2CQ6P1K8 395 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 SYCE2Q6PIF2 218 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 ZSWIM9Q86XI8 627 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 LIX1Q8N485 282 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 DNAJC22Q8N4W6 341 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 ELMO1Q92556 727 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 EMID1Q96A84 441 aaPredicted RBP11.21□□□□□ -0.61
TROAP-201ENST00000257909 GABARAPL3Q9BY60 117 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 ACOXLQ9NUZ1 547 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 NLE1Q9NVX2 485 aaPredicted RBP11.21□□□□□ -0.61
TROAP-201ENST00000257909 MAN2B2Q9Y2E5 1009 aa11.21□□□□□ -0.61
TROAP-201ENST00000257909 A8MV72 311 aaPredicted RBP11.2□□□□□ -0.62
TROAP-201ENST00000257909 MOCS2O96007 188 aaPredicted RBP11.2□□□□□ -0.62
TROAP-201ENST00000257909 PRSS56P0CW18 603 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 ADORA3P0DMS8 318 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 HAPLN1P10915 354 aaPredicted RBP11.2□□□□□ -0.62
TROAP-201ENST00000257909 PKMP14618 531 aaKnown RBP11.2□□□□□ -0.62
TROAP-201ENST00000257909 SLC19A1P41440 591 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 GNPDA1P46926 289 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 EIF4HQ15056 248 aaKnown RBP11.2□□□□□ -0.62
TROAP-201ENST00000257909 TTLL9Q3SXZ7 439 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 FAM171A1Q5VUB5 890 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 FAAH2Q6GMR7 532 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 RNF165Q6ZSG1 346 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 MILR1Q7Z6M3 343 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 CCDC28AQ8IWP9 274 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 PGBD3Q8N328 593 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 EEF1AKMT1Q8WVE0 214 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 GGHQ92820 318 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 PSMG2Q969U7 264 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 MYLPFQ96A32 169 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 RMDN1Q96DB5 314 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 NEDD4LQ96PU5 975 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 MYOCQ99972 504 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 SEMA3CQ99985 751 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 DHRS9Q9BPW9 319 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 POLR1EQ9GZS1 481 aaKnown RBP11.2□□□□□ -0.62
TROAP-201ENST00000257909 RNF167Q9H6Y7 350 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 TRIM39Q9HCM9 518 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 PRELID1Q9Y255 219 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 GPSM3Q9Y4H4 160 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 CSADQ9Y600 493 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 RRN3P2A6NIE6 340 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 ZSCAN5BA6NJL1 495 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 ERVH48-1M5A8F1 160 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 KIAA0513O60268 411 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 SEMG1P04279 462 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 MYCLP1P12525 358 aaPredicted RBP11.2□□□□□ -0.62
TROAP-201ENST00000257909 RHOQP17081 205 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 TNFSF8P32971 234 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 PBX3P40426 434 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 RFX2P48378 723 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.2□□□□□ -0.62
TROAP-201ENST00000257909 ARHGEF6Q15052 776 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 GPAT3Q53EU6 434 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 SOWAHCQ53LP3 525 aaPredicted RBP11.2□□□□□ -0.62
TROAP-201ENST00000257909 SIX5Q8N196 739 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 CACTIN-AS1Q8N1I8 211 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 CYP4Z2PQ8N1L4 340 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 C10orf111Q8N326 155 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 CADM2Q8N3J6 435 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 PGBD5Q8N414 524 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 SIDT2Q8NBJ9 832 aaKnown RBP11.2□□□□□ -0.62
TROAP-201ENST00000257909 ARRDC4Q8NCT1 418 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 SLC7A6Q92536 515 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 TXNRD2Q9NNW7 524 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 PRDM8Q9NQV8 689 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 ASAH2Q9NR71 780 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 THUMPD1Q9NXG2 353 aaKnown RBP11.2□□□□□ -0.62
TROAP-201ENST00000257909 RABL2AQ9UBK7 228 aaPredicted RBP11.2□□□□□ -0.62
TROAP-201ENST00000257909 IPPQ9Y573 584 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 PCDHB5Q9Y5E4 795 aa11.2□□□□□ -0.62
TROAP-201ENST00000257909 TIMM13Q9Y5L4 95 aaPredicted RBP11.2□□□□□ -0.62
TROAP-201ENST00000257909 A0A0U1RQS6 177 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 hCG_2039718K7EN88 272 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 CTDSP2O14595 271 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms