RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 ERVK-18Q9QC07 812 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 PRSS21Q9Y6M0 314 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 CLDN25C9JDP6 229 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 TRIM24O15164 1050 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 CDK4P11802 303 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 ZNF26P17031 533 aaPredicted RBP13.35□□□□□ -0.27
NCLN-201ENST00000246117 CD70P32970 193 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 SMARCB1Q12824 385 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 TMEM102Q8N9M5 508 aaPredicted RBP13.35□□□□□ -0.27
NCLN-201ENST00000246117 CLIP3Q96DZ5 547 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 IL17FQ96PD4 163 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 MRM3Q9HC36 420 aaKnown RBP13.35□□□□□ -0.27
NCLN-201ENST00000246117 IL26Q9NPH9 171 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 ATG2BQ96BY7 2078 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 COL5A3P25940 1745 aaPredicted RBP13.35□□□□□ -0.27
NCLN-201ENST00000246117 M0QZQ0 153 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 IFNA14P01570 189 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 KLK1P06870 262 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 PPP2R1BP30154 601 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 NXPE1Q8N323 547 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 AADATQ8N5Z0 425 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 C11orf65Q8NCR3 313 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 OR2T11Q8NH01 316 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 HSH2DQ96JZ2 352 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 UBXN10Q96LJ8 280 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 TEX12Q9BXU0 123 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 CD244Q9BZW8 370 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 TPT1P8Q9HAU6 139 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 VPS29Q9UBQ0 182 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 SLC9A8Q9Y2E8 581 aa13.35□□□□□ -0.27
NCLN-201ENST00000246117 PHIPQ8WWQ0 1821 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 FAM25AB3EWG3 89 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 FAM25CB3EWG5 89 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 FAM25GB3EWG6 89 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 RTCAO00442 366 aaKnown RBP13.34□□□□□ -0.27
NCLN-201ENST00000246117 RFPL2O75678 378 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 SNX4O95219 450 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 BPIP17213 487 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 MAPK8P45983 427 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 LMAN2Q12907 356 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 NOGQ13253 232 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 SLBPQ14493 270 aaKnown RBP eCLIP13.34□□□□□ -0.27
NCLN-201ENST00000246117 FAM86B1Q8N7N1 296 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 MYRFLQ96LU7 910 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 ZNF696Q9H7X3 374 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 GPRC5BQ9NZH0 403 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 C5AR2Q9P296 337 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 LTBP4Q8N2S1 1624 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 PCDH7O60245 1069 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 OAZ2O95190 189 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 ATE1O95260 518 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 CDC42P60953 191 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 CBX3Q13185 183 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 C1DQ13901 141 aaKnown RBP13.34□□□□□ -0.27
NCLN-201ENST00000246117 NCF4Q15080 339 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 CYP2A13Q16696 494 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 CST9Q5W186 159 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 OR2T5Q6IEZ7 315 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 C17orf99Q6UX52 265 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 RSPO2Q6UXX9 243 aaPredicted RBP13.34□□□□□ -0.27
NCLN-201ENST00000246117 MINDY1Q8N5J2 469 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 CHST14Q8NCH0 376 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 OR2T29Q8NH02 315 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 RHEBL1Q8TAI7 183 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 PROKR1Q8TCW9 393 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 NETO1Q8TDF5 533 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 ZNF382Q96SR6 550 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 KATNBL1Q9H079 304 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 VILLO15195 856 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 ASNA1O43681 348 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 TACR1P25103 407 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 SSR2P43308 183 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 SMN1Q16637 294 aaKnown RBP13.34□□□□□ -0.27
NCLN-201ENST00000246117 PLEKHG6Q3KR16 790 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 LY6G5CQ5SRR4 150 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.34□□□□□ -0.271e-6■■■■□ 20.3
NCLN-201ENST00000246117 C10orf53Q8N6V4 93 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 KREMEN2Q8NCW0 462 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 SGCDQ92629 289 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 PLD4Q96BZ4 506 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 C1GALT1C1Q96EU7 318 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 APIPQ96GX9 242 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 DMRTB1Q96MA1 342 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 CD320Q9NPF0 282 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 MTRRQ9UBK8 725 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 ITM2BQ9Y287 266 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 GPSM3Q9Y4H4 160 aa13.34□□□□□ -0.27
NCLN-201ENST00000246117 A0A0J9YVX5 310 aa13.33□□□□□ -0.28
NCLN-201ENST00000246117 ZNF99A8MXY4 864 aaPredicted RBP13.33□□□□□ -0.28
NCLN-201ENST00000246117 POP4O95707 220 aaKnown RBP13.33□□□□□ -0.28
NCLN-201ENST00000246117 ADH1AP07327 375 aa13.33□□□□□ -0.28
NCLN-201ENST00000246117 TSPAN19P0C672 248 aa13.33□□□□□ -0.28
NCLN-201ENST00000246117 FEN1P39748 380 aaKnown RBP13.33□□□□□ -0.28
NCLN-201ENST00000246117 NCS1P62166 190 aa13.33□□□□□ -0.28
NCLN-201ENST00000246117 RPS13P62277 151 aaKnown RBP13.33□□□□□ -0.28
NCLN-201ENST00000246117 CD47Q08722 323 aa13.33□□□□□ -0.28
NCLN-201ENST00000246117 CAPN13Q6MZZ7 669 aaPredicted RBP13.33□□□□□ -0.28
NCLN-201ENST00000246117 LKAAEAR1Q8TD35 194 aa13.33□□□□□ -0.28
NCLN-201ENST00000246117 TMEM245Q9H330 911 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms