RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 LY6G5CQ5SRR4 150 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 ZNF362Q5T0B9 420 aaPredicted RBP10.74□□□□□ -0.69
COPA-201ENST00000241704 CAND1Q86VP6 1230 aaKnown RBP10.74□□□□□ -0.69
COPA-201ENST00000241704 KRT73Q86Y46 540 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 HDAC2Q92769 488 aaKnown RBP10.74□□□□□ -0.69
COPA-201ENST00000241704 HHIPL1Q96JK4 782 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 SLC17A6Q9P2U8 582 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 ATPIF1Q9UII2 106 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 DCLK1O15075 740 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 NPHS1O60500 1241 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 MTRF1O75570 445 aaKnown RBP10.74□□□□□ -0.69
COPA-201ENST00000241704 SNAP29O95721 258 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 RHOP08100 348 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 PLA2G16P53816 162 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 LRRC73Q5JTD7 316 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 C16orf62Q7Z3J2 963 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 C19orf60Q96EN9 201 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 TXNDC15Q96J42 360 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 SORT1Q99523 831 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 KRT84Q9NSB2 600 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 GJD2Q9UKL4 321 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 PIPSLA2A3N6 862 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 RGS10O43665 173 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 PRAMEF11O60813 436 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 ALX3O95076 343 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 CCNDBP1O95273 360 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 CD40LGP29965 261 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 ACTR1BP42025 376 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 ACTR1AP61163 376 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 CLCQ05315 142 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 CSTF3Q12996 717 aaKnown RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 CAMK2BQ13554 666 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 TIMM50Q3ZCQ8 353 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 ZNF404Q494X3 552 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 KLHL17Q6TDP4 642 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 ZNF517Q6ZMY9 492 aaPredicted RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 RFPL4BQ6ZWI9 263 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 SNX29P2Q8IUI4 249 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 CYB5D2Q8WUJ1 264 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 LCN9Q8WX39 176 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 NECTIN4Q96NY8 510 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 POLR3BQ9NW08 1133 aaPredicted RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 AIREO43918 545 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 CST1P01037 141 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 TYRP14679 529 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 IL7RP16871 459 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 ALAS2P22557 587 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 NSG1P42857 185 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 VBP1P61758 197 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 SIGIRRQ6IA17 410 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 SPATA19Q7Z5L4 167 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 UMODL1-AS1Q8N2C9 162 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 C19orf18Q8NEA5 215 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 OR13F1Q8NGS4 319 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 RBM4BQ9BQ04 359 aaKnown RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 SLX1AQ9BQ83 275 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 RBM4Q9BWF3 364 aaKnown RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 NECTIN3Q9NQS3 549 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 FBXL12Q9NXK8 326 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 ACTR3BQ9P1U1 418 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 KDELR3O43731 214 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 SLC22A3O75751 556 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 HNRNPA1P09651 372 aaKnown RBP eCLIP10.73□□□□□ -0.69
COPA-201ENST00000241704 PRKACAP17612 351 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 HTR2BP41595 481 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 SSR2P43308 183 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 ARRB1P49407 418 aaPredicted RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 UBE3AQ05086 875 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 SLC10A2Q12908 348 aaPredicted RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 INAVAQ3KP66 663 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 SLC36A3Q495N2 470 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 NHSL2Q5HYW2 709 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 TPRG1LQ5T0D9 272 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 C2orf73Q8N5S3 287 aaPredicted RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 CPSF7Q8N684 471 aaKnown RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 TBCDQ9BTW9 1192 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 KIFC1Q9BW19 673 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 MCOLN1Q9GZU1 580 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 DCSTAMPQ9H295 470 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 SUV39H2Q9H5I1 410 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 SOX17Q9H6I2 414 aaPredicted RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 NANOGQ9H9S0 305 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 MAGEL2Q9UJ55 1249 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 LAMB2P55268 1798 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 EPOP01588 193 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 ALDOAP04075 364 aaKnown RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 CST5P28325 142 aaPredicted RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 RPIAP49247 311 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 GPR33Q49SQ1 333 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 BEND5Q7L4P6 421 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 ZC3HC1Q86WB0 502 aaKnown RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 CPNE9Q8IYJ1 553 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 AADATQ8N5Z0 425 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 BCL7BQ9BQE9 202 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 MKRN2Q9H000 416 aaKnown RBP10.73□□□□□ -0.69
COPA-201ENST00000241704 MMP27Q9H306 513 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 RETREG1Q9H6L5 497 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 ZNF224Q9NZL3 707 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 ZDHHC2Q9UIJ5 367 aa10.73□□□□□ -0.69
COPA-201ENST00000241704 BACE2Q9Y5Z0 518 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms