RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 RAD54BQ9Y620 910 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 DOCK4Q8N1I0 1966 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 TP53BP1Q12888 1972 aaPredicted RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 A0A0A6YYK5 440 aaPredicted RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 TMEM191CA6NGB0 347 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 C3orf70A6NLC5 250 aaPredicted RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 A8MV72 311 aaPredicted RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 ZNF487B1APH4 448 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 POC1B-GALNT4F8VUJ3 575 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 H3BNH8 94 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 CCDC188H7C350 402 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 C8BP07358 591 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 CISD3P0C7P0 127 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 RNF224P0DH78 156 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 ZNF250P15622 560 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 PIK3R1P27986 724 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 SERPINB5P36952 375 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 EIF2DP41214 584 aaKnown RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 CTSOP43234 321 aaPredicted RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 RPL21P46778 160 aaKnown RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 ALDH3A2P51648 485 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 YBEYP58557 167 aaPredicted RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 PITX1P78337 314 aaPredicted RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 SLC6A3Q01959 620 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 RAD51Q06609 339 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 TNK2Q07912 1038 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 PMS2P3Q13401 168 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 LTB4RQ15722 352 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 SLC1A5Q15758 541 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 SLC18A3Q16572 532 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 PDK4Q16654 411 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 MGAT5BQ3V5L5 792 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 ESCO2Q56NI9 601 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 C6orf10Q5SRN2 563 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 CACHD1Q5VU97 1274 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 SULT1C3Q6IMI6 304 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 ZNF783Q6ZMS7 281 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 PLEKHM3Q6ZWE6 761 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 TAC4Q86UU9 113 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 STK32CQ86UX6 486 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 ZSWIM9Q86XI8 627 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 CHERPQ8IWX8 916 aaKnown RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 UBALD2Q8IYN6 164 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 CELF5Q8N6W0 485 aaKnown RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 OR4M2Q8NGB6 313 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 OR2T34Q8NGX1 318 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 UBA3Q8TBC4 463 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 GPBAR1Q8TDU6 330 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 DENND1AQ8TEH3 1009 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 GTF2H4Q92759 462 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 EDAQ92838 391 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 CD101Q93033 1021 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 TESCQ96BS2 214 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 OTUB2Q96DC9 234 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 SH3YL1Q96HL8 342 aaPredicted RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 RUNDC3BQ96NL0 473 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 KCNC2Q96PR1 638 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 SNX18Q96RF0 628 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 TTYH2Q9BSA4 534 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 MLPHQ9BV36 600 aaPredicted RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 CCDC106Q9BWC9 280 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 CHID1Q9BWS9 393 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 COL25A1Q9BXS0 654 aaPredicted RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 GON7Q9BXV9 100 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 NRSN2Q9GZP1 204 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 NMUR2Q9GZQ4 415 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 TOR3AQ9H497 397 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 Q9H521 79 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 ZMAT4Q9H898 229 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 CXorf21Q9HAI6 301 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 RPRD1BQ9NQG5 326 aaKnown RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 PRMT8Q9NR22 394 aaPredicted RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 NAGPAQ9UK23 515 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 TESMINQ9Y4I5 508 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 OR51B4Q9Y5P0 310 aa3.57□□□□□ -1.84
UFM1-201ENST00000239878 KLF2Q9Y5W3 355 aaPredicted RBP3.57□□□□□ -1.84
UFM1-201ENST00000239878 CKAP5Q14008 2032 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 FANCMQ8IYD8 2048 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 A0A087X0T9 212 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 DRGXA6NNA5 263 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 WASH4PA8MWX3 477 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 ZNF701M0R085 212 aaPredicted RBP3.56□□□□□ -1.84
UFM1-201ENST00000239878 LEFTY2O00292 366 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 BTN3A1O00481 513 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 CES2O00748 559 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 AQP7O14520 342 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 FCHO1O14526 889 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 THAP12O43422 761 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 SYNCRIPO60506 623 aaKnown RBP3.56□□□□□ -1.84
UFM1-201ENST00000239878 SNAP91O60641 907 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 CCNKO75909 580 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 H6PDO95479 791 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 S1PR4O95977 384 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 GOT2P00505 430 aaKnown RBP3.56□□□□□ -1.84
UFM1-201ENST00000239878 APOA4P06727 396 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 CSF1P09603 554 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 DDCP20711 480 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 DCKP27707 260 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 GABRR2P28476 465 aa3.56□□□□□ -1.84
UFM1-201ENST00000239878 RBL1P28749 1068 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms