RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ZNF37AP17032 561 aaPredicted RBP10.89□□□□□ -0.67
SF3B6-201ENST00000233468 CNTFP26441 200 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 OAS2P29728 719 aaKnown RBP10.89□□□□□ -0.67
SF3B6-201ENST00000233468 MSH2P43246 934 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 TAS2R39P59534 338 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 RAB10P61026 200 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 ATP6V0D1P61421 351 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 SF1Q15637 639 aaKnown RBP10.89□□□□□ -0.67
SF3B6-201ENST00000233468 UAP1Q16222 522 aaPredicted RBP10.89□□□□□ -0.67
SF3B6-201ENST00000233468 CYP2A13Q16696 494 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 FBXO38Q6PIJ6 1188 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 RAPH1Q70E73 1250 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 ADAMTSL2Q86TH1 951 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 PPP1R3BQ86XI6 285 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 SYTL1Q8IYJ3 562 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 D2HGDHQ8N465 521 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 PRR11Q96HE9 360 aaPredicted RBP10.89□□□□□ -0.67
SF3B6-201ENST00000233468 FCRL4Q96PJ5 515 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 OLFM1Q99784 485 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 MCMBPQ9BTE3 642 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 PITPNM3Q9BZ71 974 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 PCBD2Q9H0N5 130 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 OCIAD1Q9NX40 245 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 ACSL6Q9UKU0 697 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 RARRES3Q9UL19 164 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 NOVA2Q9UNW9 492 aaKnown RBP10.89□□□□□ -0.67
SF3B6-201ENST00000233468 RUVBL2Q9Y230 463 aaKnown RBP10.89□□□□□ -0.67
SF3B6-201ENST00000233468 BTRCQ9Y297 605 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 MTO1Q9Y2Z2 717 aaKnown RBP10.89□□□□□ -0.67
SF3B6-201ENST00000233468 COL12A1Q99715 3063 aa10.89□□□□□ -0.67
SF3B6-201ENST00000233468 SLC9B1P1A6NJY1 282 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 CYSRT1A8MQ03 144 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 RNF223E7ERA6 249 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 STMND1H3BQB6 276 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 AGRPO00253 132 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 C1QAP02745 245 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 MSL3P1P0C860 447 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 ITIH1P19827 911 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 CCND1P24385 295 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 CMPK1P30085 196 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 SLC5A2P31639 672 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 RPA3P35244 121 aaPredicted RBP10.88□□□□□ -0.67
SF3B6-201ENST00000233468 SLC26A3P40879 764 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 PNLIPRP1P54315 467 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 PPP1CAP62136 330 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 ABATP80404 500 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 TIAL1Q01085 375 aaKnown RBP eCLIP10.88□□□□□ -0.67
SF3B6-201ENST00000233468 TUBB3Q13509 450 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 GRB7Q14451 532 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.88□□□□□ -0.67
SF3B6-201ENST00000233468 TAF1BQ53T94 588 aaPredicted RBP10.88□□□□□ -0.67
SF3B6-201ENST00000233468 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.88□□□□□ -0.67
SF3B6-201ENST00000233468 FRA10AC1Q70Z53 315 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 TBC1D1Q86TI0 1168 aaPredicted RBP10.88□□□□□ -0.67
SF3B6-201ENST00000233468 RASGRP3Q8IV61 690 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 PARP9Q8IXQ6 854 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 BMPERQ8N8U9 685 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 C19orf47Q8N9M1 422 aaKnown RBP10.88□□□□□ -0.67
SF3B6-201ENST00000233468 LSM14AQ8ND56 463 aaKnown RBP10.88□□□□□ -0.67
SF3B6-201ENST00000233468 KCNE4Q8WWG9 221 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 ZUFSPQ96AP4 578 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 TRAPPC9Q96Q05 1148 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 OR2A14Q96R47 310 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 OR6C1Q96RD1 312 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 PKP4Q99569 1192 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 MENTQ9BUN1 341 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 DPH1Q9BZG8 443 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 DERL2Q9GZP9 239 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 CTNNAL1Q9UBT7 734 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 SERTAD3Q9UJW9 196 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 TLK1Q9UKI8 766 aa10.88□□□□□ -0.67
SF3B6-201ENST00000233468 A0A087X1B8 175 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 EXOC1LA0A1B0GW35 172 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 CCDC189A1A4V9 331 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 TARM1B6A8C7 271 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 ERVH48-1M5A8F1 160 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 RIPK2O43353 540 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 PIAS1O75925 651 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 TSPAN12O95859 305 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 SLC16A8O95907 504 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 MT-ND3P03897 115 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 TPBGLP0DKB5 382 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 ERGP11308 486 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 FGF5P12034 268 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 HRH2P25021 359 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 ATP1A2P50993 1020 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 TMPRSS3P57727 454 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 ZKSCAN8Q15776 578 aaPredicted RBP10.87□□□□□ -0.67
SF3B6-201ENST00000233468 ZC3H12BQ5HYM0 836 aaKnown RBP10.87□□□□□ -0.67
SF3B6-201ENST00000233468 THEMIS2Q5TEJ8 643 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 BROXQ5VW32 411 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 KIAA1614Q5VZ46 1190 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 GPR135Q8IZ08 494 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 LMNTD1Q8N9Z9 388 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 LINC01555Q8NAE3 123 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 DENND1AQ8TEH3 1009 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 SLC44A1Q8WWI5 657 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 TTC9Q92623 222 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 MRRFQ96E11 262 aaKnown RBP10.87□□□□□ -0.67
SF3B6-201ENST00000233468 IL17FQ96PD4 163 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms