RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TARDBPQ13148 414 aaKnown RBP eCLIP18.51■□□□□ 0.55
SMPD3-201ENST00000219334 SERINC3Q13530 473 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 ELOCQ15369 112 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 GALNTL5Q7Z4T8 443 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 IQCHQ86VS3 1027 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 OR6K6Q8NGW6 343 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 KLHL6Q8WZ60 621 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 SMOQ99835 787 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 YIPF4Q9BSR8 244 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 SLC22A14Q9Y267 594 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 AK5Q9Y6K8 562 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 GATBO75879 557 aaKnown RBP18.51■□□□□ 0.55
SMPD3-201ENST00000219334 DHFRP00374 187 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 RHOP08100 348 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 PIK3CBP42338 1070 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 BDKRB1P46663 353 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 RAB2AP61019 212 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 SCARB2Q14108 478 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 IL18Q14116 193 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 TMEM126BQ8IUX1 230 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 EPYCQ99645 322 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 CTPS2Q9NRF8 586 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 SPATA6Q9NWH7 488 aaPredicted RBP18.51■□□□□ 0.55
SMPD3-201ENST00000219334 P2RX2Q9UBL9 471 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 TRAPPC6AO75865 159 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 NR2C1P13056 603 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 ACVR2AP27037 513 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 PTGIRP43119 386 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 HYAL2Q12891 473 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 TRPV1Q8NER1 839 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 B3GAT2Q9NPZ5 323 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 FARSBQ9NSD9 589 aaKnown RBP18.51■□□□□ 0.55
SMPD3-201ENST00000219334 SQORQ9Y6N5 450 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 ECI2O75521 394 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 RNASE12Q5GAN4 147 aaKnown RBP18.51■□□□□ 0.55
SMPD3-201ENST00000219334 AHSA2Q719I0 299 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 ZNF384Q8TF68 577 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 IL23AQ9NPF7 189 aa18.51■□□□□ 0.55
SMPD3-201ENST00000219334 FAM221BA6H8Z2 402 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 B4GALT2O60909 372 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 TRIM3O75382 744 aaPredicted RBP18.5■□□□□ 0.55
SMPD3-201ENST00000219334 KLK1P06870 262 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 IDH3AP50213 366 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 THOC6Q86W42 341 aaKnown RBP18.5■□□□□ 0.55
SMPD3-201ENST00000219334 MAPK15Q8TD08 544 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 FAM149AA5PLN7 773 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 ANXA2P2A6NMY6 339 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 LAMTOR5O43504 91 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 ANXA2P07355 339 aaKnown RBP18.5■□□□□ 0.55
SMPD3-201ENST00000219334 IL1R2P27930 398 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 DECR1Q16698 335 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 LPCAT4Q643R3 524 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 C12orf40Q86WS4 652 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 SETD6Q8TBK2 473 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 CDK15Q96Q40 435 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 TLL2Q9Y6L7 1015 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 TULP2O00295 520 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 TYRP1P17643 537 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 LBX1P52954 281 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 COL21A1Q96P44 957 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 CYP11A1P05108 521 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 DCUN1D3Q8IWE4 304 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 C1orf52Q8N6N3 182 aaKnown RBP18.5■□□□□ 0.55
SMPD3-201ENST00000219334 CEP295NLQ96MC4 621 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 METTL7AQ9H8H3 244 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 TVP23BQ9NYZ1 205 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 SALL4Q9UJQ4 1053 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 CYP8B1Q9UNU6 501 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 SPIN1Q9Y657 262 aaPredicted RBP18.5■□□□□ 0.55
SMPD3-201ENST00000219334 A0A075B6Q4 140 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 MAN2B1O00754 1011 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 PCDHGA12O60330 932 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 NCK1P16333 377 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 DSTNP60981 165 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 RBM44Q6ZP01 1051 aaKnown RBP18.5■□□□□ 0.55
SMPD3-201ENST00000219334 KBTBD6Q86V97 674 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 CAND1Q86VP6 1230 aaKnown RBP18.5■□□□□ 0.55
SMPD3-201ENST00000219334 SLC35B2Q8TB61 432 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 BADQ92934 168 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 UTS2RQ9UKP6 389 aa18.5■□□□□ 0.55
SMPD3-201ENST00000219334 PER3P56645 1201 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 HMGCS1Q01581 520 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 PSKH2Q96QS6 385 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 SLC35A5Q9BS91 424 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 BCAS3Q9H6U6 928 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 TMEM248Q9NWD8 314 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 SUSD2Q9UGT4 822 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 TMEM63AO94886 807 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 SLC10A3P09131 477 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 ALDH3A2P51648 485 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 MTPNP58546 118 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 TSPAN5P62079 268 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 NXPE1Q8N323 547 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 POLR2J3Q9H1A7 115 aaKnown RBP18.49■□□□□ 0.55
SMPD3-201ENST00000219334 FETUBQ9UGM5 382 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.49■□□□□ 0.55
SMPD3-201ENST00000219334 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.49■□□□□ 0.55
SMPD3-201ENST00000219334 MYCLP1P12525 358 aaPredicted RBP18.49■□□□□ 0.55
SMPD3-201ENST00000219334 ITGA3P26006 1051 aa18.49■□□□□ 0.55
SMPD3-201ENST00000219334 GSTT1P30711 240 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms