RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 HOXB6P17509 224 aaKnown RBP8.02□□□□□ -1.13
VAMP3-201ENST00000054666 AMD1P17707 334 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 PRPS1L1P21108 318 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 HSD3B2P26439 372 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 KIR3DL1P43629 444 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 RPS9P46781 194 aaKnown RBP8.02□□□□□ -1.13
VAMP3-201ENST00000054666 PNLIPRP1P54315 467 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 ACSM2AQ08AH3 577 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 MERTKQ12866 999 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 GPM6BQ13491 265 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 APOFQ13790 326 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 ZXDCQ2QGD7 858 aaPredicted RBP8.02□□□□□ -1.13
VAMP3-201ENST00000054666 HNRNPA1L2Q32P51 320 aaKnown RBP8.02□□□□□ -1.13
VAMP3-201ENST00000054666 BCL7AQ4VC05 210 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 RUNDC3AQ59EK9 446 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 NHSL2Q5HYW2 709 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 ATG9BQ674R7 924 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 ACSM2BQ68CK6 577 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 TMC5Q6UXY8 1006 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 GCNT7Q6ZNI0 430 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 DSG4Q86SJ6 1040 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 RASGRP3Q8IV61 690 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 FAM47BQ8NA70 645 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 TMIEQ8NEW7 156 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 NUDT8Q8WV74 236 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 CYGBQ8WWM9 190 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 TFAP2CQ92754 450 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 NXPE3Q969Y0 559 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 APIPQ96GX9 242 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 COQ10AQ96MF6 247 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 ZNF583Q96ND8 569 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 TBCDQ9BTW9 1192 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 GRIP2Q9C0E4 1043 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 EPHX3Q9H6B9 360 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 GORASP2Q9H8Y8 452 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 SFXN1Q9H9B4 322 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 SMPD3Q9NY59 655 aaPredicted RBP8.02□□□□□ -1.13
VAMP3-201ENST00000054666 VPS29Q9UBQ0 182 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 PCDHGB4Q9UN71 923 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 RUVBL1Q9Y265 456 aaKnown RBP8.02□□□□□ -1.13
VAMP3-201ENST00000054666 MAN2B2Q9Y2E5 1009 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 COQ6Q9Y2Z9 468 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 NEUROG3Q9Y4Z2 214 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 PCDHGB5Q9Y5G0 923 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 CROCCQ5TZA2 2017 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 CCDC160A6NGH7 325 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 CXCR6O00574 342 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 CLOCKO15516 846 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 RECQL5O94762 991 aaPredicted RBP8.02□□□□□ -1.13
VAMP3-201ENST00000054666 MT-ND1P03886 318 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 C6P13671 934 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 HLA-EP13747 358 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 ADRB3P13945 408 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 IMPA1P29218 277 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 NR1H2P55055 460 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 CNPY1Q3B7I2 92 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 PLA2G4EQ3MJ16 856 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 LRIF1Q5T3J3 769 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 NOXRED1Q6NXP6 359 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 SLC30A9Q6PML9 568 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 GET4Q7L5D6 327 aaPredicted RBP8.02□□□□□ -1.13
VAMP3-201ENST00000054666 ANKRD46Q86W74 232 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 NPAS3Q8IXF0 933 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 KLHDC8AQ8IYD2 350 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 SYTL1Q8IYJ3 562 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 MICU2Q8IYU8 434 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 C12orf76Q8N812 135 aaPredicted RBP8.02□□□□□ -1.13
VAMP3-201ENST00000054666 CDC26Q8NHZ8 85 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 FBXO30Q8TB52 745 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 SMARCD2Q92925 531 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 REPS1Q96D71 796 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 RSPRY1Q96DX4 576 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 SLC47A1Q96FL8 570 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 METTL2AQ96IZ6 378 aaKnown RBP8.02□□□□□ -1.13
VAMP3-201ENST00000054666 ZFYVE19Q96K21 471 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 ZNF514Q96K75 400 aaPredicted RBP8.02□□□□□ -1.13
VAMP3-201ENST00000054666 LRRC3BQ96PB8 259 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 CPPED1Q9BRF8 314 aaPredicted RBP8.02□□□□□ -1.13
VAMP3-201ENST00000054666 EBPLQ9BY08 206 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 TRIM4Q9C037 500 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 CAAP1Q9H8G2 361 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 BRF2Q9HAW0 419 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 SGK2Q9HBY8 427 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 SLC24A3Q9HC58 644 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 CD320Q9NPF0 282 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 THG1LQ9NWX6 298 aaKnown RBP8.02□□□□□ -1.13
VAMP3-201ENST00000054666 SLC25A37Q9NYZ2 338 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 GPRC5BQ9NZH0 403 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 THEGQ9P2T0 379 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 LIMD1Q9UGP4 676 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 ADGRE2Q9UHX3 823 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 MAPRE3Q9UPY8 281 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 PCDHGA11Q9Y5H2 935 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 KCNE2Q9Y6J6 123 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 MYOCOSA0A1B0GUC4 107 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 ENO4A6NNW6 628 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 EVPLLA8MZ36 301 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 PRRT4C9JH25 899 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 H0YIV9 168 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 LRATO95237 230 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms