RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TYRP14679 529 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 MAPK8P45983 427 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ALDH3A2P51648 485 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 PHC1P78364 1004 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 MOGQ16653 247 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 LRRC26Q2I0M4 334 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 LY6G5CQ5SRR4 150 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 CACHD1Q5VU97 1274 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 TMEM215Q68D42 235 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 USP51Q70EK9 711 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 HSD11B1LQ7Z5J1 315 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 THAP5Q7Z6K1 395 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 FAM162AQ96A26 154 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 PAWRQ96IZ0 340 aaKnown RBP12.79□□□□□ -0.36
CTNS-201ENST00000046640 INPP5KQ9BT40 448 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ZBP1Q9H171 429 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ELOVL6Q9H5J4 265 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 INIPQ9NRY2 104 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 SLC25A13Q9UJS0 675 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 NEUROG3Q9Y4Z2 214 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 AREL1O15033 823 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 CBFA2T3O75081 653 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 ALPLP05186 524 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 HIST1H2AGP0C0S8 130 aaPredicted RBP12.78□□□□□ -0.36
CTNS-201ENST00000046640 UMPSP11172 480 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 CDH1P12830 882 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 HIST1H2ADP20671 130 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 HTR1EP28566 365 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 PBLDP30039 288 aaPredicted RBP12.78□□□□□ -0.36
CTNS-201ENST00000046640 TTKP33981 857 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 OPRL1P41146 370 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 HALP42357 657 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 TSTA3Q13630 321 aaPredicted RBP12.78□□□□□ -0.36
CTNS-201ENST00000046640 KIAA0040Q15053 153 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 CTU2Q2VPK5 515 aaKnown RBP12.78□□□□□ -0.36
CTNS-201ENST00000046640 ARSIQ5FYB1 569 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 NEK5Q6P3R8 708 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 CRTC3Q6UUV7 619 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 CCDC81Q6ZN84 652 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 SPARTQ8N0X7 666 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 BPIFB1Q8TDL5 484 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 ELMO1Q92556 727 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 HIST1H2AHQ96KK5 128 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 HIST1H2AJQ99878 128 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 H2AFJQ9BTM1 129 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 FUNDC2Q9BWH2 189 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 ZNF701M0R085 212 aaPredicted RBP12.78□□□□□ -0.36
CTNS-201ENST00000046640 PRAMEF4O60810 478 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 LEFTY1O75610 366 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 OR56A5P0C7T3 313 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 EBLN1P0CF75 366 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 CTSAP10619 480 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 PABPC1P11940 636 aaKnown RBP12.78□□□□□ -0.36
CTNS-201ENST00000046640 MYCLP1P12525 358 aaPredicted RBP12.78□□□□□ -0.36
CTNS-201ENST00000046640 SPINT3P49223 89 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 AQP6Q13520 282 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 PRAMEF9Q5VWM5 478 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 IGFN1Q86VF2 1251 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 PROSER1Q86XN7 944 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 MSRB3Q8IXL7 192 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 RIMKLAQ8IXN7 391 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 CPXM2Q8N436 756 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 DPP10Q8N608 796 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 OR2A12Q8NGT7 310 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 CNIH3Q8TBE1 160 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 NRBF2Q96F24 287 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 APIPQ96GX9 242 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 APOLD1Q96LR9 279 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 ZSWIM3Q96MP5 696 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 DOK1Q99704 481 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 AMBRA1Q9C0C7 1298 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 RAD21L1Q9H4I0 556 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 FAM118AQ9NWS6 357 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 BAG5Q9UL15 447 aa12.78□□□□□ -0.36
CTNS-201ENST00000046640 TRIM64A6NGJ6 449 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 GRM6O15303 877 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 PRKD3O94806 890 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 POP4O95707 220 aaKnown RBP12.77□□□□□ -0.36
CTNS-201ENST00000046640 INHBBP09529 407 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 JAK1P23458 1154 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 CRHBPP24387 322 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 PREPP48147 710 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 BCAP31P51572 246 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 CYP4F3Q08477 520 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 KCNAB2Q13303 367 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 DGCR6Q14129 220 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 GALNT10Q86SR1 603 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 RBM23Q86U06 439 aaKnown RBP12.77□□□□□ -0.36
CTNS-201ENST00000046640 ZNF555Q8NEP9 628 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 TOX2Q96NM4 488 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 SLC32A1Q9H598 525 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 C1orf109Q9NX04 203 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 DAPK2Q9UIK4 370 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 ITM2BQ9Y287 266 aa12.77□□□□□ -0.36
CTNS-201ENST00000046640 PABPN1LA6NDY0 278 aaKnown RBP12.77□□□□□ -0.37
CTNS-201ENST00000046640 SLC28A1O00337 649 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 IFRD1O00458 451 aaPredicted RBP12.77□□□□□ -0.37
CTNS-201ENST00000046640 ABCB7O75027 752 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 MITFO75030 526 aaPredicted RBP12.77□□□□□ -0.37
CTNS-201ENST00000046640 RAP2AP10114 183 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms