RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 NCKAP1Q9Y2A7 1128 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 LYVE1Q9Y5Y7 322 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 C5orf42Q9H799 3197 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 ARID2Q68CP9 1835 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 SCN5AQ14524 2016 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 IGLON5A6NGN9 336 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 ISM1B1AKI9 464 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 CNOT3O75175 753 aaKnown RBP11.75□□□□□ -0.53
CHPF2-201ENST00000035307 H6PDO95479 791 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 APOA1P02647 267 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 SERPINB1P30740 379 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 NSG1P42857 185 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 MERTKQ12866 999 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 HSPB3Q12988 150 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 NFATC2Q13469 925 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 PARM1Q6UWI2 310 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 XKR5Q6UX68 686 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 SLC15A3Q8IY34 581 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 KAT2AQ92830 837 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 TMBIM1Q969X1 311 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 SIPA1Q96FS4 1042 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 ABHD8Q96I13 439 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 MAGEB10Q96LZ2 347 aaPredicted RBP11.75□□□□□ -0.53
CHPF2-201ENST00000035307 RIPOR3Q96MK2 946 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 FERD3LQ96RJ6 166 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 UHRF1Q96T88 793 aaPredicted RBP11.75□□□□□ -0.53
CHPF2-201ENST00000035307 SLC29A1Q99808 456 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 APOL4Q9BPW4 351 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 IGLV3-25P01717 112 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 ATXN1LP0C7T5 689 aaKnown RBP11.75□□□□□ -0.53
CHPF2-201ENST00000035307 IGFBP5P24593 272 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 TMED10P49755 219 aaKnown RBP11.75□□□□□ -0.53
CHPF2-201ENST00000035307 OR4D2P58180 307 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 RFTN1Q14699 578 aaPredicted RBP11.75□□□□□ -0.53
CHPF2-201ENST00000035307 ABRAXAS2Q15018 415 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 RAB30Q15771 203 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 APLFQ8IW19 511 aaPredicted RBP11.75□□□□□ -0.53
CHPF2-201ENST00000035307 FAM9CQ8IZT9 166 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 RNF175Q8N4F7 328 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 PIK3C3Q8NEB9 887 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 OR4K1Q8NGD4 311 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 PHF10Q8WUB8 498 aaKnown RBP11.75□□□□□ -0.53
CHPF2-201ENST00000035307 OVCA2Q8WZ82 227 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 SLC30A3Q99726 388 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 MGME1Q9BQP7 344 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 GORASP1Q9BQQ3 440 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 MKS1Q9NXB0 559 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 TOR4AQ9NXH8 423 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 H2AFY2Q9P0M6 372 aaPredicted RBP11.75□□□□□ -0.53
CHPF2-201ENST00000035307 SLAMF8Q9P0V8 285 aa11.75□□□□□ -0.53
CHPF2-201ENST00000035307 LOC285556D6RIA3 1793 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 J3QRK9 145 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 NRG2O14511 850 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 TSPAN6O43657 245 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 RPL34P49207 117 aaKnown RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 NUDT6P53370 316 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 CWF19L1Q69YN2 538 aaKnown RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 NANOGP8Q6NSW7 305 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 KLHDC10Q6PID8 442 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 ZDHHC21Q8IVQ6 265 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 PSMA8Q8TAA3 256 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 ADAMTS19Q8TE59 1207 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 BIRC7Q96CA5 298 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 FBXL8Q96CD0 374 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 YIPF4Q9BSR8 244 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 ZNF576Q9H609 170 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 XKR8Q9H6D3 395 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 SFXN1Q9H9B4 322 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 NANOGQ9H9S0 305 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 GIMAP4Q9NUV9 329 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 WDR81Q562E7 1941 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 LIN7AO14910 233 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 SUV39H1O43463 412 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 OR10H3O60404 316 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 KLF8O95600 359 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 IL6P05231 212 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 OCM2P0CE71 109 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 OCMP0CE72 109 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 MAGEA6P43360 314 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 CCR3P51677 355 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 GANABQ14697 944 aaKnown RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 NR1D2Q14995 579 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 MED22Q15528 200 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 CYP2A13Q16696 494 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 COL13A1Q5TAT6 717 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 EGFLAMQ63HQ2 1017 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 FAM81AQ8TBF8 368 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 PPCDCQ96CD2 204 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 LRRC3Q9BY71 257 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 MAP10Q9P2G4 905 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 MAGED1Q9Y5V3 778 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 A0A1W2PP18 115 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 CARNS1A5YM72 827 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 NME4O00746 187 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 NADKO95544 446 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-201ENST00000035307 ALPPL2P10696 532 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 CTSEP14091 401 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 SEPHS1P49903 392 aa11.74□□□□□ -0.53
CHPF2-201ENST00000035307 ST13P50502 369 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms