RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 RDH16O75452 317 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 MASP1P48740 699 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 GNG2P59768 71 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 MRPS6P82932 125 aaKnown RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 CYP1B1Q16678 543 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 GLYATQ6IB77 296 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 C3orf33Q6P1S2 294 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 LINC00299Q6ZSB3 139 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 COL26A1Q96A83 441 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 MTMR8Q96EF0 704 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 OR51E2Q9H255 320 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 METTL8Q9H825 291 aaKnown RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 CPNE5Q9HCH3 593 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ZFP14Q9HCL3 533 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 RGS17Q9UGC6 210 aaPredicted RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 RECQL4O94761 1208 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 AP2A2O94973 939 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 RPS2P15880 293 aaKnown RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SLC9A3P48764 834 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 PLIN5Q00G26 463 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 FAAP100Q0VG06 881 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 FSTL1Q12841 308 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 KIAA0907Q7Z7F0 614 aaPredicted RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 ZBTB2Q8N680 514 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SCGB1C1Q8TD33 95 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 CCDC106Q9BWC9 280 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 GLYATL1P3A0A0U1RQE8 302 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 NEMP2A6NFY4 417 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 E5RJQ4 531 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 AGPSO00116 658 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 PFKLP17858 780 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 L1CAMP32004 1257 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 ATP4BP51164 291 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 PGDP52209 483 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 MAZP56270 477 aaKnown RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 IL10RBQ08334 325 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 ELOAQ14241 798 aaKnown RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 MFSD13AQ14CX5 517 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 PSD4Q8NDX1 1056 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 FAM46DQ8NEK8 389 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SLC7A13Q8TCU3 470 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 CDCA5Q96FF9 252 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 GLTPQ9NZD2 209 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 OGDHLQ9ULD0 1010 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF490Q9ULM2 529 aaPredicted RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 C5P01031 1676 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 C9J4A7 227 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 CREBL2O60519 120 aaPredicted RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 CBX6O95503 412 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 ATXN1P54253 815 aaKnown RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 TMEM31Q5JXX7 168 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 OR2T5Q6IEZ7 315 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 TAS1R3Q7RTX0 852 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 OR2T29Q8NH02 315 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SNAPC3Q92966 411 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 TMEM68Q96MH6 324 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SPIN2AQ99865 258 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SPIN2BQ9BPZ2 258 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 NDOR1Q9UHB4 597 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 KIF25Q9UIL4 384 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 PCNX1Q96RV3 2341 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 LRRN3E7EW58 273 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 FSCN2O14926 492 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 INSRRP14616 1297 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 HSD11B1P28845 292 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 GHRHRQ02643 423 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 NIPAL4Q0D2K0 466 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 AIMP2Q13155 320 aaKnown RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 GTF2H2Q13888 395 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 ADGRE1Q14246 886 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 CLCA4Q14CN2 919 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SLC36A3Q495N2 470 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SH3PXD2AQ5TCZ1 1133 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 GTF2H2CQ6P1K8 395 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 METTL25Q8N6Q8 603 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 HORMAD2Q8N7B1 307 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 PRCCQ92733 491 aaPredicted RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 ZUFSPQ96AP4 578 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 TRNT1Q96Q11 434 aaKnown RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 OR5B12Q96R08 314 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 BHLHE41Q9C0J9 482 aaPredicted RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 LRRN3Q9H3W5 708 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 RNF24Q9Y225 148 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 EXOSC1Q9Y3B2 195 aaKnown RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 RIMBP3CA6NJZ7 1639 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 RIMBP3BA6NNM3 1639 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 RIMBP3Q9UFD9 1639 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 BTBD17A6NE02 478 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 CCRL2O00421 344 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 MEIS2O14770 477 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 PROM1O43490 865 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 MATN4O95460 622 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 BPNT1O95861 308 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 PENKP01210 267 aaPredicted RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 AOC1P19801 751 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 VEGFCP49767 419 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 NTRK3Q16288 839 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 TIGD2Q4W5G0 525 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 KCTD18Q6PI47 426 aaPredicted RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 DNAJC14Q6Y2X3 702 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms