RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 StimateQ3UF25 288 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Cpa6Q5U901 438 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Tex13c3Q810P0 219 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Q8BGK9 164 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Clec1aQ8BWY2 269 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Casp9Q8C3Q9 454 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Cpne5Q8JZW4 593 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Ppp1r8Q8R3G1 351 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Ccdc92Q8VDN4 314 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Znf622Q91VY9 476 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Nipal2Q91WC7 383 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 L3hypdhQ9CXA2 354 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Upk3bl1Q9D701 249 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Nif3l1Q9EQ80 376 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Atg2aQ6P4T0 1914 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gm6133B2RY53 190 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Phf11bB4XVQ1 276 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gm10800D3Z496 220 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Fam124aD3Z5V4 536 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gm7535F7CXE4 302 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gm21897J3KMP5 500 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gm17019K7N6W5 255 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gm21750L7N228 499 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Vmn2r8L7N472 848 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Npc1O35604 1277 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Mybpc3O70468 1270 aaKnown RBP18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Tuba1bP05213 451 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Surf2P09926 257 aaKnown RBP18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Znf703P0CL69 594 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Csf2rbP26955 896 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Mbl1P39039 239 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 TfamP40630 243 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Aff3P51827 1254 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Vbp1P61759 196 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Tuba1aP68369 451 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 RogdiQ3TDK6 287 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Nr2c1Q505F1 590 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Krtcap2Q5RL79 136 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Nr1h4Q60641 488 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Cdkn2cQ60772 168 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 RhocQ62159 193 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Atl1Q8BH66 558 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 PgghgQ8BP56 690 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 HnrnplQ8R081 586 aaKnown RBP18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Chil4Q91Z98 402 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Alpk2Q91ZB0 2144 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Trim12aQ99PQ1 284 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 PlgrktQ9D3P8 147 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Atad1Q9D5T0 361 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Dusp26Q9D700 211 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Rhobtb1Q9DAK3 695 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Upk1bQ9Z2C6 260 aa18.59■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Fam136b-psA0A140T8T1 138 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Tceal7A3KGA4 98 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 E030030I06RikJ3QML9 246 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Dgcr6O35347 198 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Prkag1O54950 330 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 P01636 108 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 P06324 132 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Tm9sf2P58021 662 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Rps14P62264 151 aaKnown RBP18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Dnaja1P63037 397 aaKnown RBP18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Klra2Q60660 288 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 PtprnQ60673 979 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Nr1d2Q60674 576 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Ca4Q64444 305 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Ppm1nQ8BGL1 404 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 SgtaQ8BJU0 315 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Eme1Q8BJW7 570 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Smoc1Q8BLY1 463 aaKnown RBP18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Lpcat2Q8BYI6 544 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Arhgap12Q8C0D4 838 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 SharpinQ91WA6 380 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 TrabdQ99JY4 376 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Pbx4Q99NE9 378 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Mrpl54Q9CPW3 135 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Prps2Q9CS42 318 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Snx7Q9CY18 387 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Efhc2Q9D485 750 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Olfr704Q9EPF6 315 aa18.58■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Oas1eA0A0J9YV76 386 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Znf711A2ANX9 761 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Serpinb9cI7HJI5 387 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Gm10715J3QP74 227 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Man2b1O09159 1013 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Clk3O35492 638 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Cyp1a1P00184 524 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Sox2P48432 319 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Flt3lgP49772 232 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Crhr2Q60748 411 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Phlda1Q62392 405 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Inppl1Q6P549 1257 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Slc39a4Q78IQ7 660 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Ube2q1Q7TSS2 422 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Efr3aQ8BG67 819 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Gprc5aQ8BHL4 356 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Aifm2Q8BUE4 373 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Mfsd14bQ8CIA9 507 aa18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Cnot3Q8K0V4 751 aaKnown RBP18.58■□□□□ 0.56
Ccdc50-201ENSMUST00000039443 Fam20bQ8VCS3 409 aa18.58■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 93 ms