RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gm3115L7N285 211 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 PbsnO08976 174 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 HgdO09173 445 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Elovl3O35949 271 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 PahP16331 453 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Htr1bP28334 386 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ido1P28776 407 aaKnown RBP13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 TfamP40630 243 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Nr4a2Q06219 598 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Spryd7Q3TFQ1 196 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Echdc2Q3TLP5 296 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 TCAIMQ66JZ4 499 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tnpo3Q6P2B1 923 aaKnown RBP13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Nudcd1Q6PIP5 582 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 PdprQ7TSQ8 878 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rmnd5aQ80YQ8 391 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rbm11Q80YT9 238 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Psmd11Q8BG32 422 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Hmbox1Q8BJA3 419 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Serpinb9dQ8BMT0 377 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Dnajc27Q8CFP6 273 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ntmt1Q8R2U4 223 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ska2Q9CR46 120 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Xylt2Q9EPL0 865 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Cpne6Q9Z140 557 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gm42688A0A0R3P9D1 673 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Zfp738B8JJX8 793 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Catsperg2C6KI89 1145 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Apol11bE9PUZ0 337 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vmn1r184E9Q2N4 314 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vmn2r10K7N621 847 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Cyp8b1O88962 500 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ncam1P13595 1115 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Hmga1P17095 107 aaKnown RBP13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Nfkb1P25799 971 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ptpn6P29351 595 aaKnown RBP13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Folr1P35846 255 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Mapkapk2P49138 386 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Smpdl3aP70158 445 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 NficP70255 439 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ctps1P70698 591 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 VldlrP98156 873 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 TekQ02858 1122 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Cdk18Q04899 451 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Dok6Q2MHE5 331 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Sppl2bQ3TD49 578 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 MagixQ4KL35 324 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Aldh16a1Q571I9 802 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Cpsf6Q6NVF9 551 aaKnown RBP13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tmem214Q8BM55 687 aaKnown RBP13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tmem259Q8CIV2 574 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Appl1Q8K3H0 707 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Olfr1263Q8VG63 306 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Nipal2Q91WC7 383 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Pcdhgb2Q91XX7 928 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Adgrl4Q923X1 739 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 MlycdQ99J39 492 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Q99LU8 229 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ehd1Q9WVK4 534 aaKnown RBP13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gm6592A2AHC7 168 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Slc25a54B1AUS6 473 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ifi213D3Z5G0 586 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Trim30bE9PVL6 203 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Arhgap40E9Q6X9 672 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Kifc3O35231 824 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 NfkbieO54910 364 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Odc1P00860 461 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ccr7P47774 378 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Pcyt1aP49586 367 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 OstnP61364 130 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Usp39Q3TIX9 564 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ulk3Q3U3Q1 472 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Zfp560Q3URI6 754 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 HecaQ3V1N5 544 aaKnown RBP13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 GstcdQ5RL51 634 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Olfr381Q5SSP0 311 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Eif2b4Q61749 524 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Olfr1015Q7TR94 312 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fate1Q8CEK7 99 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Elp2Q91WG4 831 aaKnown RBP13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Nrif1Q923B3 828 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Mri1Q9CQT1 369 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gemin6Q9CX53 166 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Alg14Q9D081 217 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rhox2aQ9D4Y3 191 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Erap1Q9EQH2 930 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Elovl2Q9JLJ4 292 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Kcne5Q9QZ26 143 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vmn1r49Q9WUF1 310 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Oas1eA0A0J9YV76 386 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rpl9-ps6A0A140T8T4 192 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 4930595M18RikA2RRY9 829 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 9230113P08RikD3YWX3 137 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gm19965J3QNY8 723 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 P01636 108 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 P06324 132 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 LifP09056 203 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Hoxd4P10628 250 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Pcsk2P21661 637 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Csf2rbP26955 896 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms