RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Epm2aip1Q8VEH5 606 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Pdzd3Q99MJ6 498 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm16286Q9CQX6 220 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 EefsecQ9JHW4 583 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Noa1Q9JJG9 693 aaKnown RBP8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Vps29Q9QZ88 182 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm4869A0A1B0GSG7 984 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 CatsperbA2RTF1 1109 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tceal7A3KGA4 98 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Armc4B2RY50 1037 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm17093F6XGJ4 214 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm21738J3QP72 227 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Kcnk1O08581 336 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 CenpaO35216 134 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 MndaP0DOV1 425 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Slc7a2P18581 657 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Esr1P19785 599 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 MaxP28574 160 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gdf7P43029 461 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ccr7P47774 378 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Lrpap1P55302 360 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Cntn5P68500 1098 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Cab39Q06138 341 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 DmwdQ08274 665 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fbxw18Q3TSA9 469 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Pnrc1Q3TWH3 297 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Lrrn4clQ3TYX2 239 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Mthfd1lQ3V3R1 977 aaKnown RBP8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 MarcoQ60754 518 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Vsx2Q61412 361 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Cyp2d40Q6P8N9 338 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ces2bQ6PDB7 556 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Slitrk2Q810C0 846 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Spin4Q8K1L2 249 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 ZwilchQ8R060 589 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr722Q8VFC8 308 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr866Q8VFI7 312 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Asb17Q8VHP9 295 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Alg14Q9D081 217 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Stk19Q9JHN8 254 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gon4lQ9DB00 2260 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Spin2gA0A0N4SW15 236 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Spin2eJ3QNQ0 234 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tulp3O88413 460 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 JunP05627 334 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Inpp5jP59644 1003 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Dusp2Q05922 318 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Hk3Q3TRM8 922 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ankrd27Q3UMR0 1048 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Hs3st2Q673U1 367 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Znf280cQ6P3Y5 742 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ddx51Q6P9R1 639 aaKnown RBP8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Kiss1Q6Y4S4 130 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Prickle2Q80Y24 845 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Cox14Q8BH51 57 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Klhl31Q8BWA5 634 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tmem252Q8C353 183 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tprg1Q8CB49 279 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 LctlQ8K1F9 566 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Trnt1Q8K1J6 434 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr541Q8VGM0 312 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 VitQ8VHI5 650 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Diras1Q91Z61 198 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 TmlheQ91ZE0 421 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Nkd1Q99MH6 471 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Khdc3Q9CWU5 440 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Hnrnpa0Q9CX86 305 aaKnown RBP8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ttc25Q9D4B2 624 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tex16F6WNY1 1150 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 H2-Q8P14430 326 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Pou3f3P31361 497 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gbx2P48031 348 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 H2-Q6P79568 326 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Crisp1Q03401 244 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Abraxas2Q3TCJ1 415 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 TiprlQ8BH58 271 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ckap4Q8BMK4 575 aaKnown RBP8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Colec12Q8K4Q8 742 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Map3k21Q8VDG6 1002 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 H2-BlV9GXR0 257 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm20441G3UYJ7 252 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Chrm1P12657 460 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Rb1P13405 921 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Txnl4aP83877 142 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Pou1f1Q00286 291 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Serpina3mQ03734 418 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tmem102Q3UPR7 509 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 B020004J07RikQ3UTC0 476 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr1037Q7TR84 321 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr297Q7TS07 310 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fam72aQ8BFZ8 149 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fam20bQ8VCS3 409 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr1467Q8VFW1 308 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Adgrl4Q923X1 739 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ppp2r2dQ925E7 453 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 4930578G10RikQ9D4Q4 153 aa8.27□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fam131cA2ADB2 273 aa8.27□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 Prrt4B2RU40 902 aa8.27□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 Adh6aE9Q5Z6 375 aa8.27□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 Herc6F2Z461 1003 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms