RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Macrod2Q3UYG8 475 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Armc5Q5EBP3 926 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Slc25a23Q6GQS1 467 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Lingo3Q6GQU6 589 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 DgkbQ6NS52 802 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Dnajc15Q78YY6 149 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 AptxQ7TQC5 342 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr1313Q7TQW8 311 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Trim36Q80WG7 729 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Msantd1Q8BIL2 278 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gucy1b2Q8BXH3 824 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Neu4Q8BZL1 478 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Swi5Q8K3D3 89 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Batf2Q8R1H8 277 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Utp6Q8VCY6 597 aaKnown RBP10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gadd45gip1Q9CR59 222 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Spcs2Q9CYN2 226 aaKnown RBP10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Mgat4dQ9D4R2 373 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Q9D5Y0 588 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Mrpl46Q9EQI8 283 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Chrnb2Q9ERK7 501 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Katna1Q9WV86 491 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 F8Q06194 2319 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm7792A0A0J9YU01 481 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 5830411N06RikB3F5L4 1112 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm3183D3YUJ6 481 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Vmn2r38G3UYA8 861 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm3139J3QK78 481 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm3106J3QPH3 481 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Vmn2r33K7N705 861 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ltb4rO88855 351 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Tnfsf4P43488 198 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Nr5a2P45448 560 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Nudt2P56380 147 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Btbd3P58545 530 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Pou1f1Q00286 291 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Mrpl10Q3TBW2 262 aaKnown RBP10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gpr174Q3U507 335 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Hephl1Q3V1H3 1159 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ckmt2Q6P8J7 419 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Kmt5cQ6Q783 468 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Lair1Q8BG84 263 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Itpk1Q8BYN3 419 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Usp45Q8K387 813 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 ClmpQ8R373 373 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr474Q8VFC9 310 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr1302Q8VGE9 315 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Slc15a4Q91W98 574 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Atp6v1c2Q99L60 427 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Pdzd3Q99MJ6 498 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Efhd2Q9D8Y0 240 aaKnown RBP10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Il21Q9ES17 146 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cmtm7Q9ESD6 167 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 IL36RNQ9QYY1 156 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cldn7Q9Z261 211 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Taf1Q80UV9 1891 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Lipo4D3Z608 396 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 MntO08789 591 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Rab23P35288 237 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Rad51Q08297 339 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Smim24Q0VG18 120 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gdpgp1Q3TLS3 386 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Trpc5osQ3UHV4 110 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Xkr5Q5GH66 676 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 IspdQ5RJG7 447 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Hesx1Q61658 185 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Pou4f2Q63934 411 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Txndc15Q6P6J9 344 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Nudcd1Q6PIP5 582 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Scn4bQ7M729 228 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr1080Q7TR67 313 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Znf410Q8BKX7 478 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Piwil2Q8CDG1 971 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 RhdQ8CF94 418 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gramd1cQ8CI52 457 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr985Q8VGB4 311 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Rprd1bQ9CSU0 326 aaKnown RBP10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Dcun1d5Q9CXV9 237 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Tmem135Q9CYV5 458 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gsk3bQ9WV60 420 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Zyg11aA2BFL2 627 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Zcchc7B1AX39 541 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr564E9PWA8 316 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Sgo2bJ3QMK1 1167 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Rab12P35283 243 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Id2P41136 134 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Aup1P70295 410 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ccbe1Q3MI99 408 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Bdkrb1Q61125 334 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Klhl5Q6PFE1 708 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Tlr12Q6QNU9 906 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Mppe1Q80XL7 396 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Itln1bQ80ZA0 313 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Zc3hav1lQ8BFR1 296 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ckap4Q8BMK4 575 aaKnown RBP10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ston1Q8CDJ8 730 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 N4bp2l2Q8JZS6 575 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Adgrg3Q8R0T6 542 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr45Q8VGM1 311 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cd209eQ91ZW7 208 aa10.63□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms