RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 NIPAL1Q6NVV3 410 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 BCL7CQ8WUZ0 217 aaPredicted RBP16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 SPATA17Q96L03 361 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 RDH12Q96NR8 316 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 SERHLQ9NQF3 203 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 SACM1LQ9NTJ5 587 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 USE1Q9NZ43 259 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 VPS51Q9UID3 782 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 PPT2Q9UMR5 302 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 PCDHB1Q9Y5F3 818 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 SOBPA7XYQ1 873 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 UGT2B11O75310 529 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 STK16O75716 305 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 DAPP51397 102 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 EPS8Q12929 822 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 CPZQ66K79 652 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 ANKS3Q6ZW76 656 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 CHPFQ8IZ52 775 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 RBFAQ8N0V3 343 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 ZNF540Q8NDQ6 660 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 PDLIM5Q96HC4 596 aaKnown RBP16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 SH3GL1Q99961 368 aa16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 CPPED1Q9BRF8 314 aaPredicted RBP16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 INTS6Q9UL03 887 aaKnown RBP16.13■□□□□ 0.17
HNRNPU-228ENST00000640306 FKBP9O95302 570 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 MT-ND2P03891 347 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 CSKP41240 450 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 MAD2L1Q13257 205 aaPredicted RBP16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 TAF12Q16514 161 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 RFLNAQ6ZTI6 216 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 FKBP9P1Q75LS8 142 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 APIPQ96GX9 242 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 HERC2P3Q9BVR0 1158 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 CHD5Q8TDI0 1954 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 RFXANKO14593 260 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 BPIP17213 487 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 ITIH1P19827 911 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 ITGALP20701 1170 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 CD6P30203 668 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 MASP1P48740 699 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 CLK3P49761 638 aaKnown RBP16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 HSPA14Q0VDF9 509 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 INAQ16352 499 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 CARTPTQ16568 116 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 ADCK1Q86TW2 530 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 ANKRD13BQ86YJ7 626 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 PIK3C3Q8NEB9 887 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 FBXO22Q8NEZ5 403 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 PIH1D2Q8WWB5 315 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 ELOVL6Q9H5J4 265 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 AMBNQ9NP70 447 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 MBD1Q9UIS9 605 aaPredicted RBP16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 PCDHGA10Q9Y5H3 936 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 GMPPBQ9Y5P6 360 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 INPPL1O15357 1258 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 CD9P21926 228 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 ITPKAP23677 461 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 AQP1P29972 269 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 NRIP1P48552 1158 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 RPIAP49247 311 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 CASP9P55211 416 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 GABARAPL2P60520 117 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 ZNF846Q147U1 533 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 APCDD1Q8J025 514 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 TMEM132CQ8N3T6 1108 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 GLB1L3Q8NCI6 653 aaPredicted RBP16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 SLC22A12Q96S37 553 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 HMG20AQ9NP66 347 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 PDP1Q9P0J1 537 aaPredicted RBP16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 ZNF451Q9Y4E5 1061 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 TRIM17Q9Y577 477 aa16.12■□□□□ 0.17
HNRNPU-228ENST00000640306 TRBV5-3A0A0A0MS03 114 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 CLDN9O95484 217 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 CPSF4O95639 269 aaKnown RBP16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 RETP07949 1114 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 EPORP19235 508 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 PSMA3P25788 255 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 HNF1BP35680 557 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 VLDLRP98155 873 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 GSTM4Q03013 218 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 DDX39BQ13838 428 aaKnown RBP16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 ZXDCQ2QGD7 858 aaPredicted RBP16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 Q6ZPB1 254 aaPredicted RBP16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 HIPK1Q86Z02 1210 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 ATG16L2Q8NAA4 619 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 CREBZFQ9NS37 354 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 TMEM45AQ9NWC5 275 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 GLYATL1P3A0A0U1RQE8 302 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 FZD6O60353 706 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 RECQL5O94762 991 aaPredicted RBP16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 PGLSO95336 258 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 BMP4P12644 408 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 SFSWAPQ12872 951 aaKnown RBP16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 CDH18Q13634 790 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 GBX1Q14549 363 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 SYT16Q17RD7 645 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 CERS6Q6ZMG9 384 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 ZNF621Q6ZSS3 439 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 AHSA2Q719I0 299 aa16.11■□□□□ 0.17
HNRNPU-228ENST00000640306 TRIM46Q7Z4K8 759 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms