RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 MAP7D1Q3KQU3 841 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 PLA2G4EQ3MJ16 856 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 TMEM126BQ8IUX1 230 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 SFTPA1Q8IWL2 248 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 CHCHD4Q8N4Q1 142 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 TRAM1L1Q8N609 369 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 DNAJB14Q8TBM8 379 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 TMEM125Q96AQ2 219 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 SEMA4GQ9NTN9 838 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 INTS7Q9NVH2 962 aaKnown RBP13.49□□□□□ -0.25
ATRIP-208ENST00000639561 NFKBIL1Q9UBC1 381 aaPredicted RBP13.49□□□□□ -0.25
ATRIP-208ENST00000639561 TRPS1Q9UHF7 1281 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 SLC27A6Q9Y2P4 619 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 AP4S1Q9Y587 144 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 PCDHGA5Q9Y5G8 931 aa13.49□□□□□ -0.25
ATRIP-208ENST00000639561 GFYI3L273 518 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 SPINT1O43278 529 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 CAPNS1P04632 268 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 C8GP07360 202 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 HSD17B1P14061 328 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 MSH3P20585 1137 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 TIE1P35590 1138 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 RPL38P63173 70 aaKnown RBP13.48□□□□□ -0.25
ATRIP-208ENST00000639561 PRKG2Q13237 762 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 USP39Q53GS9 565 aaKnown RBP13.48□□□□□ -0.25
ATRIP-208ENST00000639561 PLEKHS1Q5SXH7 462 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 TMEM154Q6P9G4 183 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 SLC2A7Q6PXP3 512 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 DGLUCYQ7Z3D6 616 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 DHFR2Q86XF0 187 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 IL17RCQ8NAC3 791 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 FAM110BQ8TC76 370 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 LRIG1Q96JA1 1093 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 ZSCAN5AQ9BUG6 496 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 TRIM54Q9BYV2 358 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 SLC32A1Q9H598 525 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 EGFL7Q9UHF1 273 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 LEF1Q9UJU2 399 aaPredicted RBP13.48□□□□□ -0.25
ATRIP-208ENST00000639561 LRRK1Q38SD2 2015 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 SPTBN4Q9H254 2564 aa13.48□□□□□ -0.25
ATRIP-208ENST00000639561 ZFC3H1O60293 1989 aaKnown RBP13.48□□□□□ -0.25
ATRIP-208ENST00000639561 A6NHS1 94 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 ASLP04424 464 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 ENO2P09104 434 aaPredicted RBP13.47□□□□□ -0.25
ATRIP-208ENST00000639561 UBTFL6P0CB48 400 aaPredicted RBP13.47□□□□□ -0.25
ATRIP-208ENST00000639561 UQCRBP14927 111 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 XPAP23025 273 aaPredicted RBP13.47□□□□□ -0.25
ATRIP-208ENST00000639561 GRIA3P42263 894 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 CASP2P42575 452 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 KIR2DL1P43626 348 aaPredicted RBP13.47□□□□□ -0.25
ATRIP-208ENST00000639561 CDKL1Q00532 357 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 PTGR1Q14914 329 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 SGO1Q5FBB7 561 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 CDKL4Q5MAI5 379 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 FBXL19Q6PCT2 694 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 LIPIQ6XZB0 460 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 PRR23CQ6ZRP0 262 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 TRIM46Q7Z4K8 759 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 NETO1Q8TDF5 533 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 WFIKKN2Q8TEU8 576 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 ELMO1Q92556 727 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 USP7Q93009 1102 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 PYCR2Q96C36 320 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 NR1H4Q96RI1 486 aaPredicted RBP13.47□□□□□ -0.25
ATRIP-208ENST00000639561 FAM8A1Q9UBU6 413 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 ZNHIT2Q9UHR6 403 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 ZNF490Q9ULM2 529 aaPredicted RBP13.47□□□□□ -0.25
ATRIP-208ENST00000639561 MUC22E2RYF6 1773 aaPredicted RBP13.47□□□□□ -0.25
ATRIP-208ENST00000639561 ZNF839A8K0R7 811 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 CFAP99D6REC4 459 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 MANBAO00462 879 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 KPNA3O00505 521 aaPredicted RBP13.47□□□□□ -0.25
ATRIP-208ENST00000639561 ULK1O75385 1050 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 ELFN1P0C7U0 828 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 MPC1LP0DKB6 136 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 HLA-EP13747 358 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 SLC2A4P14672 509 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 SLC6A12P48065 614 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 CTSCP53634 463 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 PTCHD3Q3KNS1 767 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 PLK5Q496M5 336 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 NEK5Q6P3R8 708 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 RNF165Q6ZSG1 346 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 RGL4Q8IZJ4 473 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 ZNF513Q8N8E2 541 aaPredicted RBP13.47□□□□□ -0.25
ATRIP-208ENST00000639561 OR2T34Q8NGX1 318 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 OR2T3Q8NH03 318 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 BTN2A2Q8WVV5 523 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 LRTOMTQ8WZ04 291 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 DUS3LQ96G46 650 aaKnown RBP13.47□□□□□ -0.25
ATRIP-208ENST00000639561 PPP3R2Q96LZ3 170 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 TMEM74Q96NL1 305 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 WRAP53Q9BUR4 548 aaKnown RBP13.47□□□□□ -0.25
ATRIP-208ENST00000639561 TMEM45AQ9NWC5 275 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 PLXND1Q9Y4D7 1925 aa13.47□□□□□ -0.25
ATRIP-208ENST00000639561 DPPA5A6NC42 116 aa13.46□□□□□ -0.25
ATRIP-208ENST00000639561 RGS14O43566 566 aa13.46□□□□□ -0.25
ATRIP-208ENST00000639561 TSPAN6O43657 245 aa13.46□□□□□ -0.25
ATRIP-208ENST00000639561 WDR47O94967 919 aa13.46□□□□□ -0.25
ATRIP-208ENST00000639561 CLDN9O95484 217 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms