RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ZFYVE19Q96K21 471 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 CCM2Q9BSQ5 444 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 CIDEBQ9UHD4 219 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 SLC27A6Q9Y2P4 619 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 A0A1B0GTW7 788 aa20.91■□□□□ 0.94
CLN6-224ENST00000638076 RASAL1O95294 804 aa20.91■□□□□ 0.94
CLN6-224ENST00000638076 LDLRP01130 860 aa20.91■□□□□ 0.94
CLN6-224ENST00000638076 SDC1P18827 310 aa20.91■□□□□ 0.94
CLN6-224ENST00000638076 IRF8Q02556 426 aa20.91■□□□□ 0.94
CLN6-224ENST00000638076 PYCR3Q53H96 274 aa20.91■□□□□ 0.94
CLN6-224ENST00000638076 RUNDC3AQ59EK9 446 aa20.91■□□□□ 0.94
CLN6-224ENST00000638076 TMEM220Q6QAJ8 160 aa20.91■□□□□ 0.94
CLN6-224ENST00000638076 AADATQ8N5Z0 425 aa20.91■□□□□ 0.94
CLN6-224ENST00000638076 APOLD1Q96LR9 279 aa20.91■□□□□ 0.94
CLN6-224ENST00000638076 CCDC115Q96NT0 180 aa20.91■□□□□ 0.94
CLN6-224ENST00000638076 COQ6Q9Y2Z9 468 aa20.91■□□□□ 0.94
CLN6-224ENST00000638076 TMED5Q9Y3A6 229 aa20.91■□□□□ 0.94
CLN6-224ENST00000638076 SMIM31A0A1B0GVY4 71 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 MAPK1P28482 360 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 PBLDP30039 288 aaPredicted RBP20.9■□□□□ 0.94
CLN6-224ENST00000638076 S100A3P33764 101 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 SLC6A11P48066 632 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 APOFQ13790 326 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 CCSMST1Q4G0I0 132 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 THOC6Q86W42 341 aaKnown RBP20.9■□□□□ 0.94
CLN6-224ENST00000638076 RIMKLAQ8IXN7 391 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 METTL25Q8N6Q8 603 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 ZNF548Q8NEK5 533 aaPredicted RBP20.9■□□□□ 0.94
CLN6-224ENST00000638076 BPIFB1Q8TDL5 484 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 GLMNQ92990 594 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 SH3GL1Q99961 368 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 SLC24A3Q9HC58 644 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 SLC6A13Q9NSD5 602 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 DPP7Q9UHL4 492 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 PCDHB14Q9Y5E9 798 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 CDH23Q9H251 3354 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 SLC5A10A0PJK1 596 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 EI24O14681 340 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 GSTA4O15217 222 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 OR6B1O95007 311 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 FESP07332 822 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 HLA-EP13747 358 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 AMD1P17707 334 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 CD22P20273 847 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 LIPJQ5W064 366 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 NRSN1Q8IZ57 195 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 SLC22A15Q8IZD6 547 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 MED8Q96G25 268 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 VPS50Q96JG6 964 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 MAGEB10Q96LZ2 347 aaPredicted RBP20.9■□□□□ 0.94
CLN6-224ENST00000638076 ADI1Q9BV57 179 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 GRIP2Q9C0E4 1043 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 PNPLA3Q9NST1 481 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 OLAHQ9NV23 265 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 CHD9Q3L8U1 2897 aa20.9■□□□□ 0.94
CLN6-224ENST00000638076 TRBV5-3A0A0A0MS03 114 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 LRATO95237 230 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 PRNPP04156 253 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 BDKRB1P46663 353 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 MERTKQ12866 999 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 XKR6Q5GH73 641 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 TMC5Q6UXY8 1006 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 ETFBKMTQ8IXQ9 262 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 PHACTR4Q8IZ21 702 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 FAM9CQ8IZT9 166 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 FAM47BQ8NA70 645 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 ST13P5Q8NFI4 369 aaPredicted RBP20.89■□□□□ 0.94
CLN6-224ENST00000638076 EGLN2Q96KS0 407 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 TBCDQ9BTW9 1192 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 PAIP1Q9H074 479 aaKnown RBP20.89■□□□□ 0.94
CLN6-224ENST00000638076 GORASP2Q9H8Y8 452 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 SERHLQ9NQF3 203 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 STOX2Q9P2F5 926 aaPredicted RBP20.89■□□□□ 0.94
CLN6-224ENST00000638076 PPT2Q9UMR5 302 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 INVSQ9Y283 1065 aa20.89■□□□□ 0.94
CLN6-224ENST00000638076 SERTM1A2A2V5 107 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 E7EQ34 232 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 NPIPB8E9PQR5 432 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 PSMD11O00231 422 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 SPINT1O43278 529 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 H6PDO95479 791 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 CATP04040 527 aaKnown RBP20.89■□□□□ 0.93
CLN6-224ENST00000638076 GNAO1P09471 354 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 NAE1Q13564 534 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 PGS1Q32NB8 556 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 FNDC3BQ53EP0 1204 aaKnown RBP20.89■□□□□ 0.93
CLN6-224ENST00000638076 AGTRAPQ6RW13 159 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 TNIP2Q8NFZ5 429 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 VN1R2Q8NFZ6 395 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 GFM2Q969S9 779 aaKnown RBP20.89■□□□□ 0.93
CLN6-224ENST00000638076 DTD2Q96FN9 168 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 CCDC138Q96M89 665 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 COQ10AQ96MF6 247 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 BDH2Q9BUT1 245 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 EPB41L1Q9H4G0 881 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 CAAP1Q9H8G2 361 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 C8orf4Q9NR00 106 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 NDUFA13Q9P0J0 144 aa20.89■□□□□ 0.93
CLN6-224ENST00000638076 OTOL1A6NHN0 477 aaPredicted RBP20.88■□□□□ 0.93
CLN6-224ENST00000638076 AHCYL1O43865 530 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms