RNA–Protein interactions for RNA: ENST00000637699.1

CLN3-262, Transcript of CLN3, battenin, humanhuman

TSL 2

Gene CLN3, Length 1,228 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-262ENST00000637699 PCDHA3Q9Y5H8 950 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 MAU2Q9Y6X3 613 aa18.59■□□□□ 0.57
CLN3-262ENST00000637699 ANKRD17O75179 2603 aaKnown RBP18.58■□□□□ 0.57
CLN3-262ENST00000637699 A0A1B0GUH1 482 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 CCDC162PA2VCL2 907 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 METTL18O95568 372 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 STSP08842 583 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 CD9P21926 228 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 GRM7Q14831 915 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 SF1Q15637 639 aaKnown RBP18.58■□□□□ 0.56
CLN3-262ENST00000637699 CCDC38Q502W7 563 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 DNAJC21Q5F1R6 531 aaKnown RBP18.58■□□□□ 0.56
CLN3-262ENST00000637699 ZC3H12BQ5HYM0 836 aaKnown RBP18.58■□□□□ 0.56
CLN3-262ENST00000637699 FCRL6Q6DN72 434 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 FIGLAQ6QHK4 219 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 VRK3Q8IV63 474 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 MCEMP1Q8IX19 187 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 TAB3Q8N5C8 712 aaPredicted RBP18.58■□□□□ 0.56
CLN3-262ENST00000637699 OR1N1Q8NGS0 311 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 SLC22A18Q96BI1 424 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 VPS50Q96JG6 964 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 MAGEB10Q96LZ2 347 aaPredicted RBP18.58■□□□□ 0.56
CLN3-262ENST00000637699 SLX1AQ9BQ83 275 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 LRRC40Q9H9A6 602 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 LUC7LQ9NQ29 371 aaKnown RBP18.58■□□□□ 0.56
CLN3-262ENST00000637699 SEMA3GQ9NS98 782 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 INTS7Q9NVH2 962 aaKnown RBP18.58■□□□□ 0.56
CLN3-262ENST00000637699 COPG2Q9UBF2 871 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 NXT1Q9UKK6 140 aaKnown RBP18.58■□□□□ 0.56
CLN3-262ENST00000637699 PCDHA13Q9Y5I0 950 aa18.58■□□□□ 0.56
CLN3-262ENST00000637699 MROH6A6NGR9 719 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 JRKO75564 520 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 FOXN2P32314 431 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 HSPA14Q0VDF9 509 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 MFAP5Q13361 173 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 TCTE1Q5JU00 501 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 YOD1Q5VVQ6 348 aaPredicted RBP18.57■□□□□ 0.56
CLN3-262ENST00000637699 PRSS58Q8IYP2 241 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 SLC22A15Q8IZD6 547 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 BCORP1Q8N888 145 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 FAM71DQ8N9W8 422 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 TTC29Q8NA56 475 aaPredicted RBP18.57■□□□□ 0.56
CLN3-262ENST00000637699 LMF1Q96S06 567 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 SELENOSQ9BQE4 189 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 CRB3Q9BUF7 120 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 MENTQ9BUN1 341 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 ZNF160Q9HCG1 818 aa18.57■□□□□ 0.56
CLN3-262ENST00000637699 MYO7BQ6PIF6 2116 aa18.56■□□□□ 0.56
CLN3-262ENST00000637699 TJP3O95049 919 aa18.56■□□□□ 0.56
CLN3-262ENST00000637699 S1PR4O95977 384 aa18.56■□□□□ 0.56
CLN3-262ENST00000637699 CCR7P32248 378 aa18.56■□□□□ 0.56
CLN3-262ENST00000637699 PTPN7P35236 360 aa18.56■□□□□ 0.56
CLN3-262ENST00000637699 KCNK10P57789 538 aa18.56■□□□□ 0.56
CLN3-262ENST00000637699 TBX2Q13207 712 aaPredicted RBP18.56■□□□□ 0.56
CLN3-262ENST00000637699 POLQO75417 2590 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 VSTM2BA6NLU5 285 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 PSMA3P25788 255 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 CETN2P41208 172 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 RWDD2BP57060 319 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 VSX2P58304 361 aaPredicted RBP18.55■□□□□ 0.56
CLN3-262ENST00000637699 ARG2P78540 354 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 KLC1Q07866 573 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 GRB7Q14451 532 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 FAM214AQ32MH5 1076 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 WASHC2DQ5SRD0 308 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 RPUSD3Q6P087 351 aaKnown RBP18.55■□□□□ 0.56
CLN3-262ENST00000637699 DCUN1D3Q8IWE4 304 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 OR2L8Q8NGY9 312 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 HDAC10Q969S8 669 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 C8orf44Q96CB5 159 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 TTC1Q99614 292 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 RUBCNLQ9H714 662 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 IL1RAPL1Q9NZN1 696 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 SLC39A10Q9ULF5 831 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 FBN2P35556 2912 aa18.55■□□□□ 0.56
CLN3-262ENST00000637699 HYKKA2RU49 373 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 IQCF5A8MTL0 148 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 F8W8V4 182 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 CTSVO60911 334 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 HPP00738 406 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 RPN2P04844 631 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 ACPPP15309 386 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 GRNP28799 593 aaKnown RBP18.54■□□□□ 0.56
CLN3-262ENST00000637699 CARSP49589 748 aaKnown RBP18.54■□□□□ 0.56
CLN3-262ENST00000637699 OCA2Q04671 838 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 SPA17Q15506 151 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 NLRP9Q7RTR0 991 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 OR52K1Q8NGK4 314 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 STT3BQ8TCJ2 826 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 LKAAEAR1Q8TD35 194 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 ALG3Q92685 438 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 RELTQ969Z4 430 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 ZNF285Q96NJ3 590 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 ZNF304Q9HCX3 659 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 PLA2G3Q9NZ20 509 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 PTGFRNQ9P2B2 879 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 STOX2Q9P2F5 926 aaPredicted RBP18.54■□□□□ 0.56
CLN3-262ENST00000637699 SLC2A6Q9UGQ3 507 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 C3orf18Q9UK00 162 aa18.54■□□□□ 0.56
CLN3-262ENST00000637699 PDZD2O15018 2839 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms