RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TMED2Q15363 201 aa17.72■□□□□ 0.43
CLN6-220ENST00000637450 SF1Q15637 639 aaKnown RBP17.72■□□□□ 0.43
CLN6-220ENST00000637450 CYP2A13Q16696 494 aa17.72■□□□□ 0.43
CLN6-220ENST00000637450 ZC3H12BQ5HYM0 836 aaKnown RBP17.72■□□□□ 0.43
CLN6-220ENST00000637450 OVCH1Q7RTY7 1134 aa17.72■□□□□ 0.43
CLN6-220ENST00000637450 IQCKQ8N0W5 287 aa17.72■□□□□ 0.43
CLN6-220ENST00000637450 ZUFSPQ96AP4 578 aa17.72■□□□□ 0.43
CLN6-220ENST00000637450 FKBP10Q96AY3 582 aa17.72■□□□□ 0.43
CLN6-220ENST00000637450 TREX1Q9NSU2 369 aa17.72■□□□□ 0.43
CLN6-220ENST00000637450 MAP10Q9P2G4 905 aa17.72■□□□□ 0.43
CLN6-220ENST00000637450 SLC39A10Q9ULF5 831 aa17.72■□□□□ 0.43
CLN6-220ENST00000637450 GUCA1BQ9UMX6 200 aa17.72■□□□□ 0.43
CLN6-220ENST00000637450 TARM1B6A8C7 271 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 AGPSO00116 658 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 KRT86O43790 486 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 IPO13O94829 963 aaKnown RBP17.71■□□□□ 0.43
CLN6-220ENST00000637450 FKBP9O95302 570 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 ALBP02768 609 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 PIM1P11309 404 aaPredicted RBP17.71■□□□□ 0.43
CLN6-220ENST00000637450 RPS3P23396 243 aaKnown RBP eCLIP17.71■□□□□ 0.43
CLN6-220ENST00000637450 MMP11P24347 488 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 CDC25BP30305 580 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 SESN2P58004 480 aaPredicted RBP17.71■□□□□ 0.43
CLN6-220ENST00000637450 SIX1Q15475 284 aaPredicted RBP17.71■□□□□ 0.43
CLN6-220ENST00000637450 CCNG2Q16589 344 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 TCTE1Q5JU00 501 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 MEI1Q5TIA1 1274 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 YOD1Q5VVQ6 348 aaPredicted RBP17.71■□□□□ 0.43
CLN6-220ENST00000637450 PTRHD1Q6GMV3 140 aaKnown RBP17.71■□□□□ 0.43
CLN6-220ENST00000637450 TTC23LQ6PF05 361 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 TAX1BP1Q86VP1 789 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 SPC24Q8NBT2 197 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 RAD51AP1Q96B01 352 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 ZNF285Q96NJ3 590 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 PANX3Q96QZ0 392 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 TSGA10Q9BZW7 698 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 SLC26A1Q9H2B4 701 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 WDR54Q9H977 334 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 EIF2B3Q9NR50 452 aaKnown RBP17.71■□□□□ 0.43
CLN6-220ENST00000637450 CUTCQ9NTM9 273 aa17.71■□□□□ 0.43
CLN6-220ENST00000637450 DRG1Q9Y295 367 aaKnown RBP17.71■□□□□ 0.43
CLN6-220ENST00000637450 DSCR3O14972 297 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 KPNA5O15131 536 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 C1orf105O95561 183 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 RNF224P0DH78 156 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 MCM3P25205 808 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 NPY2RP49146 381 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 CRADDP78560 199 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 AIMP2Q13155 320 aaKnown RBP17.7■□□□□ 0.42
CLN6-220ENST00000637450 GRM7Q14831 915 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 RPS6KA1Q15418 735 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 NKG7Q16617 165 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 CRB2Q5IJ48 1285 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 HIST2H2BCQ6DN03 193 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 DRICH1Q6PGQ1 229 aaPredicted RBP17.7■□□□□ 0.42
CLN6-220ENST00000637450 LRRC6Q86X45 466 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 MPP5Q8N3R9 675 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 ZADH2Q8N4Q0 377 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 CISD2Q8N5K1 135 aaKnown RBP17.7■□□□□ 0.42
CLN6-220ENST00000637450 GSDMBQ8TAX9 411 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 PRR7Q8TB68 274 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 TM9SF4Q92544 642 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 RAB11FIP5Q9BXF6 653 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 IL22Q9GZX6 179 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 ZBTB20Q9HC78 741 aaPredicted RBP17.7■□□□□ 0.42
CLN6-220ENST00000637450 ASF1BQ9NVP2 202 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 GNPTGQ9UJJ9 305 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 TTC7AQ9ULT0 858 aaPredicted RBP17.7■□□□□ 0.42
CLN6-220ENST00000637450 KLK4Q9Y5K2 254 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 NFS1Q9Y697 457 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 UNC79Q9P2D8 2635 aa17.7■□□□□ 0.42
CLN6-220ENST00000637450 FITM1A5D6W6 292 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 NDUFS3O75489 264 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 CBX6O95503 412 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 NMBRP28336 390 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 CCSMST1Q4G0I0 132 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 C4orf22Q6V702 233 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 Q6ZS92 163 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 COX15Q7KZN9 410 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 HMGCLL1Q8TB92 370 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.69■□□□□ 0.42
CLN6-220ENST00000637450 INPP5DQ92835 1189 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 SPSB2Q99619 263 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 SELENOSQ9BQE4 189 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 ILKAPQ9H0C8 392 aaPredicted RBP17.69■□□□□ 0.42
CLN6-220ENST00000637450 BFARQ9NZS9 450 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 CDC23Q9UJX2 597 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 FBXL4Q9UKA2 621 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 MRFAP1Q9Y605 127 aa17.69■□□□□ 0.42
CLN6-220ENST00000637450 SNRNP200O75643 2136 aaKnown RBP17.68■□□□□ 0.42
CLN6-220ENST00000637450 AP3B1O00203 1094 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 SOCS6O14544 535 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 SRPX2O60687 465 aaPredicted RBP17.68■□□□□ 0.42
CLN6-220ENST00000637450 CTSVO60911 334 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 DDAH2O95865 285 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 ITGA3P26006 1051 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 NR6A1Q15406 480 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 FAM214AQ32MH5 1076 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 CTSL3PQ5NE16 218 aa17.68■□□□□ 0.42
CLN6-220ENST00000637450 PRAMEF13Q5VWM6 474 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms