RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 MYBL1P10243 752 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 VDRP11473 427 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 IFNAR1P17181 557 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 DDX5P17844 614 aaKnown RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 CD58P19256 250 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 ANXA7P20073 488 aaKnown RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 CCND2P30279 289 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 CTNNB1P35222 781 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 AVPR1AP37288 418 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 THPOP40225 353 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 PRCPP42785 496 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 SUOXP51687 545 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 RAD23BP54727 409 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 CDH12P55289 794 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 ST3GAL1Q11201 340 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 ALCAMQ13740 583 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 SNTB1Q13884 538 aaKnown RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 SCARB2Q14108 478 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 IGSF11Q5DX21 431 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 IL27RAQ6UWB1 636 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 TMEM184AQ6ZMB5 413 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 PQLC2Q6ZP29 291 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 MFSD6Q6ZSS7 791 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 FAM43BQ6ZT52 329 aaPredicted RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 CCDC186Q7Z3E2 898 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 GALNTL5Q7Z4T8 443 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 SLFN11Q7Z7L1 901 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 PATL1Q86TB9 770 aaKnown RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 IQCA1Q86XH1 822 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 GPSM1Q86YR5 675 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 GALNT13Q8IUC8 556 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 ARID3BQ8IVW6 561 aaPredicted RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 MB21D2Q8IYB1 491 aaPredicted RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 CCDC13Q8IYE1 715 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 MYOCDQ8IZQ8 938 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 SCCPDHQ8NBX0 429 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 PTPMT1Q8WUK0 201 aaPredicted RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 NUDCD2Q8WVJ2 157 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 TAF15Q92804 592 aaKnown RBP eCLIP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 ATP6V0A1Q93050 837 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 RMDN1Q96DB5 314 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 MSI2Q96DH6 328 aaKnown RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 CEP295NLQ96MC4 621 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 SPATA33Q96N06 139 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 ZNF570Q96NI8 536 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 DGAT2Q96PD7 388 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 WDR77Q9BQA1 342 aaPredicted RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 NPFFR1Q9GZQ6 430 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 S1PR5Q9H228 398 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 RNF41Q9H4P4 317 aaPredicted RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 ZWILCHQ9H900 591 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 MAP6D1Q9H9H5 199 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 LY9Q9HBG7 655 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 MKKSQ9NPJ1 570 aaPredicted RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 CYSLTR2Q9NS75 346 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 GDE1Q9NZC3 331 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 WDR35Q9P2L0 1181 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 CTNNA3Q9UI47 895 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 MUTYHQ9UIF7 546 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 TUBE1Q9UJT0 475 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 OSGIN1Q9UJX0 560 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 FBXW11Q9UKB1 542 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 R3HDM2Q9Y2K5 976 aaKnown RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 MRPL11Q9Y3B7 192 aaKnown RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 UBIAD1Q9Y5Z9 338 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 STON1Q9Y6Q2 735 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 TPRP12270 2363 aaKnown RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 BOD1L1Q8NFC6 3051 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 NFASCO94856 1347 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 VWA8A3KMH1 1905 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 MYH15Q9Y2K3 1946 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 BAHCC1Q9P281 2608 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 SPTBN2O15020 2390 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 PKD1L2Q7Z442 2459 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 PTPRZ1P23471 2315 aaPredicted RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 IGLV3-22A0A075B6J6 115 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 TRBC2A0A5B9 178 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 KANSL1LA0AUZ9 987 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 LNP1A1A4G5 178 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 C1orf226A1L170 272 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 TMEM221A6NGB7 291 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 A6NL46 340 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 A6NNC1 897 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 ZNF814B7Z6K7 855 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 M0R296 226 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 MDM4O15151 490 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 EDIL3O43854 480 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 ATG13O75143 517 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 PSMD10O75832 226 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 PLEKHA8P1O95397 391 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 C22orf31O95567 290 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 FTCDO95954 541 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 CCNE2O96020 404 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 IFNA2P01563 188 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 CCDC175P0C221 793 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 GHRP10912 638 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 CHRNB1P11230 501 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 HOXB2P14652 356 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 MMP9P14780 707 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 CHRNB2P17787 502 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms