RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 FAM207AQ9NSI2 230 aaPredicted RBP2.9□□□□□ -1.95
VBP1-204ENST00000625964 RNF186Q9NXI6 227 aa2.9□□□□□ -1.95
VBP1-204ENST00000625964 HAO2Q9NYQ3 351 aa2.9□□□□□ -1.95
VBP1-204ENST00000625964 DDX25Q9UHL0 483 aaKnown RBP2.9□□□□□ -1.95
VBP1-204ENST00000625964 SLC24A2Q9UI40 661 aa2.9□□□□□ -1.95
VBP1-204ENST00000625964 GRID1Q9ULK0 1009 aa2.9□□□□□ -1.95
VBP1-204ENST00000625964 STUB1Q9UNE7 303 aa2.9□□□□□ -1.95
VBP1-204ENST00000625964 TMED3Q9Y3Q3 217 aa2.9□□□□□ -1.95
VBP1-204ENST00000625964 RNF215Q9Y6U7 377 aa2.9□□□□□ -1.95
VBP1-204ENST00000625964 NISCHQ9Y2I1 1504 aa2.9□□□□□ -1.95
VBP1-204ENST00000625964 IGLV7-46A0A075B6I9 117 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 A0A0J9YWU9 116 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 ENO4A6NNW6 628 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 ERAL1O75616 437 aaKnown RBP2.89□□□□□ -1.95
VBP1-204ENST00000625964 ZFAND5O76080 213 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 CLDN1O95832 211 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 LINGO3P0C6S8 592 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 HAPLN1P10915 354 aaPredicted RBP2.89□□□□□ -1.95
VBP1-204ENST00000625964 MPZP25189 248 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 MAZP56270 477 aaKnown RBP2.89□□□□□ -1.95
VBP1-204ENST00000625964 MAT1AQ00266 395 aaKnown RBP2.89□□□□□ -1.95
VBP1-204ENST00000625964 TAF10Q12962 218 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 CA9Q16790 459 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 LETM2Q2VYF4 491 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 XKR3Q5GH77 459 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 CFAP58Q5T655 872 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 WDR78Q5VTH9 848 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 GARNL3Q5VVW2 1013 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 MFSD12Q6NUT3 480 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 ENOSF1Q7L5Y1 443 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 CAMKMTQ7Z624 323 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 MAPK1IP1LQ8NDC0 245 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 VANGL1Q8TAA9 524 aaPredicted RBP2.89□□□□□ -1.95
VBP1-204ENST00000625964 ARHGAP45Q92619 1136 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 ANKZF1Q9H8Y5 726 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 ABT1Q9ULW3 272 aaKnown RBP2.89□□□□□ -1.95
VBP1-204ENST00000625964 PRSS21Q9Y6M0 314 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 FAM169AQ9Y6X4 670 aa2.89□□□□□ -1.95
VBP1-204ENST00000625964 MSGN1A6NI15 193 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 C2orf81A6NN90 581 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 H7C423 109 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 K7ENM7 598 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 KHDRBS3O75525 346 aaKnown RBP2.88□□□□□ -1.95
VBP1-204ENST00000625964 DARSP14868 501 aaKnown RBP2.88□□□□□ -1.95
VBP1-204ENST00000625964 LBX1P52954 281 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 MAPK12P53778 367 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 KRTAP12-2P59991 146 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 GCNT1Q02742 428 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 HERC3Q15034 1050 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 E2F5Q15329 346 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 XKR6Q5GH73 641 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 GPR139Q6DWJ6 353 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 NUP54Q7Z3B4 507 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 PTAR1Q7Z6K3 402 aaPredicted RBP2.88□□□□□ -1.95
VBP1-204ENST00000625964 HOGA1Q86XE5 327 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 MMD2Q8IY49 270 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 DCLK2Q8N568 766 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 GPRC5AQ8NFJ5 357 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 C18orf12Q96KH6 178 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 FAM20AQ96MK3 541 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 IWS1Q96ST2 819 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 SYT11Q9BT88 431 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 PANK2Q9BZ23 570 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 TRIM15Q9C019 465 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 SHARPINQ9H0F6 387 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 CPVLQ9H3G5 476 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 MYNNQ9NPC7 610 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 PRMT7Q9NVM4 692 aaPredicted RBP2.88□□□□□ -1.95
VBP1-204ENST00000625964 OR6C2Q9NZP2 312 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 TRIM17Q9Y577 477 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 TRPV2Q9Y5S1 764 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 EPHB6O15197 1021 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 DDHD2O94830 711 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 NXPH2O95156 264 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 DUS4LO95620 317 aaKnown RBP2.88□□□□□ -1.95
VBP1-204ENST00000625964 IGHV2-70P01814 119 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 RAB40ALP0C0E4 278 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 CSTF2P33240 577 aaKnown RBP eCLIP2.88□□□□□ -1.95
VBP1-204ENST00000625964 IFI35P80217 286 aaPredicted RBP2.88□□□□□ -1.95
VBP1-204ENST00000625964 SNTB1Q13884 538 aaKnown RBP2.88□□□□□ -1.95
VBP1-204ENST00000625964 HLA-BQ31612 363 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 UGT3A2Q3SY77 523 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 FIP1L1Q6UN15 594 aaKnown RBP2.88□□□□□ -1.95
VBP1-204ENST00000625964 TMEM207Q6UWW9 146 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 BRINP3Q76B58 766 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 BTN2A1Q7KYR7 527 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 THAP8Q8NA92 274 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 POMGNT2Q8NAT1 580 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 SMAP2Q8WU79 429 aaPredicted RBP2.88□□□□□ -1.95
VBP1-204ENST00000625964 ATL1Q8WXF7 558 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 PIGBQ92521 554 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 SECISBP2LQ93073 1101 aaKnown RBP2.88□□□□□ -1.95
VBP1-204ENST00000625964 AZIN2Q96A70 460 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 MOCOSQ96EN8 888 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 AGAP3Q96P47 875 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 VGLL1Q99990 258 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 DGCR6LQ9BY27 220 aa2.88□□□□□ -1.95
VBP1-204ENST00000625964 NOL11Q9H8H0 719 aaKnown RBP2.88□□□□□ -1.95
VBP1-204ENST00000625964 CNOT10Q9H9A5 744 aaKnown RBP2.88□□□□□ -1.95
VBP1-204ENST00000625964 OLAHQ9NV23 265 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms