RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 CLIP4Q8N3C7 705 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 TRPV1Q8NER1 839 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 RHOXF1Q8NHV9 184 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 EEF1AKMT1Q8WVE0 214 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 KCNJ9Q92806 393 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 NACC2Q96BF6 587 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 RBM38Q9H0Z9 239 aaKnown RBP11.55□□□□□ -0.56
ATRX-214ENST00000624166 TRIT1Q9H3H1 467 aaKnown RBP11.55□□□□□ -0.56
ATRX-214ENST00000624166 PCDHB7Q9Y5E2 793 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 HS3ST4Q9Y661 456 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 GLYATL1P3A0A0U1RQE8 302 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 DLGAP1O14490 977 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 WNT9AO14904 365 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 MAFKO60675 156 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 CNTN5O94779 1100 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 PRAMEF1O95521 474 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 RETP07949 1114 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 ANXA4P09525 319 aaPredicted RBP11.55□□□□□ -0.56
ATRX-214ENST00000624166 EBLN1P0CF75 366 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 ZNF24P17028 368 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 MYL9P24844 172 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 DCTP40126 519 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 PSMD8P48556 350 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 NUDT6P53370 316 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 ARHGAP1Q07960 439 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 MAB21L1Q13394 359 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 HMBOX1Q6NT76 420 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 SERPINA9Q86WD7 417 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 HJURPQ8NCD3 748 aaPredicted RBP11.55□□□□□ -0.56
ATRX-214ENST00000624166 ACVR1CQ8NER5 493 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 ANKRD49Q8WVL7 239 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 HSH2DQ96JZ2 352 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 DUSP26Q9BV47 211 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 SARDHQ9UL12 918 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 PCDHGC4Q9Y5F7 938 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 A0A096LPI6 279 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 NDUFB5O43674 189 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 DPP6P42658 865 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 RPP38P78345 283 aaKnown RBP11.55□□□□□ -0.56
ATRX-214ENST00000624166 GNA13Q14344 377 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 PON2Q15165 354 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 DUOXA1Q1HG43 343 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 SMU1Q2TAY7 513 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 HKDC1Q2TB90 917 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 RNF111Q6ZNA4 994 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 C11orf96Q7Z7L8 435 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 CFAP52Q8N1V2 620 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 SCAMP5Q8TAC9 235 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 KLHL6Q8WZ60 621 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 KCNN1Q92952 543 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 MUL1Q969V5 352 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 TM6SF2Q9BZW4 377 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 SCN7AQ01118 1682 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 CLTBP09497 229 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 PSKH1P11801 424 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 CDH4P55283 916 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 INHBEP58166 350 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 RIPPLY1Q0D2K3 151 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.55□□□□□ -0.56
ATRX-214ENST00000624166 FGD2Q7Z6J4 655 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 RETREG3Q86VR2 466 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 GALNT13Q8IUC8 556 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 DENND1CQ8IV53 801 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 PAPD5Q8NDF8 572 aaKnown RBP11.55□□□□□ -0.56
ATRX-214ENST00000624166 PGAP3Q96FM1 320 aaPredicted RBP11.55□□□□□ -0.56
ATRX-214ENST00000624166 KCTD7Q96MP8 289 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 ZCCHC2Q9C0B9 1178 aaKnown RBP11.55□□□□□ -0.56
ATRX-214ENST00000624166 MRPL39Q9NYK5 338 aaKnown RBP11.55□□□□□ -0.56
ATRX-214ENST00000624166 SEC14L4Q9UDX3 406 aa11.55□□□□□ -0.56
ATRX-214ENST00000624166 LRRC14BA6NHZ5 514 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 CYP2A6P11509 494 aaPredicted RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 PBLDP30039 288 aaPredicted RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 AGTR2P50052 363 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 CHIT1Q13231 466 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 KEAP1Q14145 624 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 WSCD2Q2TBF2 565 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 KLHL22Q53GT1 634 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 ERAP2Q6P179 960 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 SHQ1Q6PI26 577 aaKnown RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 DEF8Q6ZN54 512 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 PHACTR4Q8IZ21 702 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 OR7D4Q8NG98 312 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 ZNF671Q8TAW3 534 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 NDNFQ8TB73 568 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 C1QTNF1Q9BXJ1 281 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 GPR45Q9Y5Y3 372 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 DDX60LQ5H9U9 1706 aaKnown RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 TMEM221A6NGB7 291 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 MANBAO00462 879 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 PGRMC2O15173 223 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 PEX10O60683 326 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 UGT2B17O75795 530 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 SLC2A2P11168 524 aaPredicted RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 POU2F1P14859 743 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 TCEA1P23193 301 aaKnown RBP11.54□□□□□ -0.56
ATRX-214ENST00000624166 ITPKAP23677 461 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 TAF10Q12962 218 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 NPRL3Q12980 569 aa11.54□□□□□ -0.56
ATRX-214ENST00000624166 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.54□□□□□ -0.56
ATRX-214ENST00000624166 ENPP6Q6UWR7 440 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms