RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 RDM1Q8NG50 284 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 CLHC1Q8NHS4 586 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ZNF669Q96BR6 464 aaPredicted RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 PDXPQ96GD0 296 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 AHCYL2Q96HN2 611 aaKnown RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 RADILQ96JH8 1075 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 FAM213AQ9BRX8 229 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 SPATA6Q9NWH7 488 aaPredicted RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 XPR1Q9UBH6 696 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 CYTH4Q9UIA0 394 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 HACL1Q9UJ83 578 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 SPATA2Q9UM82 520 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 PLCL2Q9UPR0 1127 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 PCDHB5Q9Y5E4 795 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 PCDHB14Q9Y5E9 798 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 TNPO3Q9Y5L0 923 aaKnown RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 GMPPBQ9Y5P6 360 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ALG5Q9Y673 324 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 E9PAM4 449 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 CACNB4O00305 520 aaPredicted RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 MEIS2O14770 477 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 SCAMP3O14828 347 aaKnown RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 CA12O43570 354 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 PLATP00750 562 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 HMGCRP04035 888 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 RAF1P04049 648 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 SERPINF2P08697 491 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 JUNDP17535 347 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 SDC4P31431 198 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 SREBF1P36956 1147 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 AVPR1AP37288 418 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 KCNJ5P48544 419 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 NOVP48745 357 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 MEOX2P50222 304 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ATP4BP51164 291 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 FOXM1Q08050 763 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 HYAL2Q12891 473 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ABRQ12979 859 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 RPA4Q13156 261 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 RFX4Q33E94 735 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 SPANXN3Q5MJ09 141 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 PDZK1Q5T2W1 519 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 FAM160B2Q86V87 743 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 PTRH1Q86Y79 214 aaKnown RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 KIAA0319LQ8IZA0 1049 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 OR4D10Q8NGI6 311 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 STYXQ8WUJ0 223 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 SLC5A11Q8WWX8 675 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 EXT2Q93063 718 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 TMEM125Q96AQ2 219 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 COQ8BQ96D53 544 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ITCHQ96J02 903 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 SERPINB11Q96P15 392 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 DPCDQ9BVM2 203 aaPredicted RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 GLIS2Q9BZE0 524 aaPredicted RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 C11orf54Q9H0W9 315 aaPredicted RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 POMKQ9H5K3 350 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 RNF167Q9H6Y7 350 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 KCNH7Q9NS40 1196 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 MCUBQ9NWR8 336 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 DNAJB9Q9UBS3 223 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ADAM30Q9UKF2 790 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ABCG2Q9UNQ0 655 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 PCDHA9Q9Y5H5 950 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 FKBP7Q9Y680 259 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 WASHC1A8K0Z3 465 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ST8SIA5O15466 376 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 FZD6O60353 706 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 CD72P21854 359 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 GPX3P22352 226 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 PRKACGP22612 351 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 GPC1P35052 558 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 RARRES1P49788 294 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 RBP5P82980 135 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 SP2Q02086 613 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 SP4Q02446 784 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 PUDPQ08623 228 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 PPP1R8Q12972 351 aaKnown RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 ASAH1Q13510 395 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 FAM83EQ2M2I3 478 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ANKRD34AQ69YU3 496 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 TMEM179Q6ZVK1 233 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 RIMKLAQ8IXN7 391 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ATOH1Q92858 354 aaPredicted RBP7.74□□□□□ -1.17
VPS11-209ENST00000622309 AGAP2Q99490 1192 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 C1QTNF1Q9BXJ1 281 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ZNF518BQ9C0D4 1074 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 RIBC2Q9H4K1 309 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ABCB8Q9NUT2 735 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 SETD4Q9NVD3 440 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 MORF4L1Q9UBU8 362 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 INVSQ9Y283 1065 aa7.74□□□□□ -1.17
VPS11-209ENST00000622309 ZFC3H1O60293 1989 aaKnown RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 C17orf113A0A1B0GUU1 675 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 FXYD1O00168 92 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 PRPSAP2O60256 369 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 MRPS14O60783 128 aaKnown RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 RHOBTB1O94844 696 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 APOL3O95236 402 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 F2P00734 622 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms