RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 GSDMDP57764 484 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 ASIC1P78348 528 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 PTGISQ16647 500 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 SMU1Q2TAY7 513 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 PHLDA2Q53GA4 152 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 GLRA4Q5JXX5 417 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 CYP4A22Q5TCH4 519 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 ZNF554Q86TJ5 538 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 MMD2Q8IY49 270 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 C10orf53Q8N6V4 93 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 Q8N9P0 234 aaPredicted RBP4.56□□□□□ -1.68
CPNE3-213ENST00000622183 OR2T12Q8NG77 320 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 OR11H4Q8NGC9 324 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 OR1J1Q8NGS3 322 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 HSD17B8Q92506 261 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 PROX1Q92786 737 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 RIT1Q92963 219 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 TEKT1Q969V4 418 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 THOC3Q96J01 351 aaKnown RBP4.56□□□□□ -1.68
CPNE3-213ENST00000622183 FAM20AQ96MK3 541 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 UTP14AQ9BVJ6 771 aaKnown RBP4.56□□□□□ -1.68
CPNE3-213ENST00000622183 PRRG4Q9BZD6 226 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 MIS12Q9H081 205 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 S1PR5Q9H228 398 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 HIPK2Q9H2X6 1198 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 MINDY3Q9H8M7 445 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 ZBTB20Q9HC78 741 aaPredicted RBP4.56□□□□□ -1.68
CPNE3-213ENST00000622183 A4GALTQ9NPC4 353 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 GSN-AS1Q9NRJ2 163 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 SLC7A7Q9UM01 511 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 JRKLQ9Y4A0 524 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 SNX5Q9Y5X3 404 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 A0A1W2PN81 502 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 SLC33A1O00400 549 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-213ENST00000622183 CAPN9O14815 690 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 ZNF263O14978 683 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 ST8SIA3O43173 380 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 PPIP5K2O43314 1243 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 XPNPEP2O43895 674 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 RPS6KA5O75582 802 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 SNHG28P0DPA3 235 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 FGF5P12034 268 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 LBPP18428 481 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 DGKAP23743 735 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 PSMB4P28070 264 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 CHRNA7P36544 502 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 KCNJ1P48048 391 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 FOXG1P55316 489 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-213ENST00000622183 LGALS3BPQ08380 585 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 ILF2Q12905 390 aaKnown RBP4.55□□□□□ -1.68
CPNE3-213ENST00000622183 ILF3Q12906 894 aaKnown RBP eCLIP4.55□□□□□ -1.68
CPNE3-213ENST00000622183 TAZQ16635 292 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 ODF4Q2M2E3 257 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 ITPRIPL2Q3MIP1 535 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 CASC4Q6P4E1 433 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 PHLDB2Q86SQ0 1253 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 SAMD14Q8IZD0 417 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-213ENST00000622183 CARNMT1Q8N4J0 409 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 METTL27Q8N6F8 245 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-213ENST00000622183 UXS1Q8NBZ7 420 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 DBF4BQ8NFT6 615 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 OR4K1Q8NGD4 311 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 SLC47A1Q96FL8 570 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 BSCL2Q96G97 398 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-213ENST00000622183 FAM71F1Q96KD3 344 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-213ENST00000622183 MARK4Q96L34 752 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 ZNF583Q96ND8 569 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 IL1RAPL2Q9NP60 686 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 DNAJC17Q9NVM6 304 aaKnown RBP4.55□□□□□ -1.68
CPNE3-213ENST00000622183 PCDHGB1Q9Y5G3 927 aa4.55□□□□□ -1.68
CPNE3-213ENST00000622183 HEG1Q9ULI3 1381 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 LRRD1A4D1F6 860 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 ARPC2O15144 300 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 FLRT2O43155 660 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 PIGNO95427 931 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 C9P02748 559 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 HNF4AP41235 474 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 CDX1P47902 265 aaPredicted RBP4.54□□□□□ -1.68
CPNE3-213ENST00000622183 DVL1P1P54792 670 aaPredicted RBP4.54□□□□□ -1.68
CPNE3-213ENST00000622183 KLC1Q07866 573 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 COASYQ13057 564 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 DMP1Q13316 513 aaPredicted RBP4.54□□□□□ -1.68
CPNE3-213ENST00000622183 CDC37Q16543 378 aaPredicted RBP4.54□□□□□ -1.68
CPNE3-213ENST00000622183 IZUMO4Q1ZYL8 232 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 SUSD4Q5VX71 490 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 CAPRIN2Q6IMN6 1127 aaKnown RBP4.54□□□□□ -1.68
CPNE3-213ENST00000622183 CYB5D1Q6P9G0 228 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 NHLRC1Q6VVB1 395 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 FOXL2NBQ6ZUU3 175 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 EXOC3L1Q86VI1 746 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 FOXP4Q8IVH2 680 aaPredicted RBP4.54□□□□□ -1.68
CPNE3-213ENST00000622183 NDUFAF2Q8N183 169 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 OLIG1Q8TAK6 271 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 SPATA20Q8TB22 786 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 PIGBQ92521 554 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 P2RX5Q93086 422 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 PANK2Q9BZ23 570 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 ZNF350Q9GZX5 532 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 LAT2Q9GZY6 243 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 SNX25Q9H3E2 840 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms