RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PABPC1P11940 636 aaKnown RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 PCNAP12004 261 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 JUPP14923 745 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 JUNBP17275 347 aaPredicted RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 AMD1P17707 334 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 CYP2A7P20853 494 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 TACR1P25103 407 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 CCR2P41597 374 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 MAGEA2P43356 314 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 PFN3P60673 137 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 PMS2P3Q13401 168 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 FRG2Q64ET8 278 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 ZNF773Q6PK81 442 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 CHPFQ8IZ52 775 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 C10orf111Q8N326 155 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 PGBD3Q8N328 593 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 TMEM132CQ8N3T6 1108 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 ZCCHC7Q8N3Z6 543 aaKnown RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 ZNF557Q8N988 423 aaPredicted RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 CHST14Q8NCH0 376 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 DDHD1Q8NEL9 900 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 CLHC1Q8NHS4 586 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 FBXO30Q8TB52 745 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 FBXL8Q96CD0 374 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 FRG2BQ96QU4 278 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 RNF208Q9H0X6 261 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 ABCG8Q9H221 673 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 DNAJC11Q9NVH1 559 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 SAGE1Q9NXZ1 904 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 IFT80Q9P2H3 777 aaPredicted RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 EBF1Q9UH73 591 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 SLCO3A1Q9UIG8 710 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 MAGED1Q9Y5V3 778 aaPredicted RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 PER2O15055 1255 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 PRMT3O60678 531 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 CST1P01037 141 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 DDX6P26196 483 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDPN-212ENST00000621990 S100A3P33764 101 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 SHMT2P34897 504 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 NEK2P51955 445 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 HPCAP84074 193 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 ABHD18Q0P651 414 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 CSTF3Q12996 717 aaKnown RBP9.17□□□□□ -0.94
PDPN-212ENST00000621990 RAB39AQ14964 217 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 PLCL1Q15111 1095 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 LIPJQ5W064 366 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 TTC23Q5W5X9 447 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 DNAJC14Q6Y2X3 702 aaPredicted RBP9.17□□□□□ -0.94
PDPN-212ENST00000621990 GCNT7Q6ZNI0 430 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 Q6ZVU0 165 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 GPR155Q7Z3F1 870 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 SERPINA11Q86U17 422 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 STK32CQ86UX6 486 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 CLVS1Q8IUQ0 354 aaPredicted RBP9.17□□□□□ -0.94
PDPN-212ENST00000621990 PHACTR4Q8IZ21 702 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 ELMOD1Q8N336 334 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 CSGALNACT1Q8TDX6 532 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 FAM162AQ96A26 154 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 MTFMTQ96DP5 389 aaKnown RBP9.17□□□□□ -0.94
PDPN-212ENST00000621990 C11orf24Q96F05 449 aaPredicted RBP9.17□□□□□ -0.94
PDPN-212ENST00000621990 APIPQ96GX9 242 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 RBM4BQ9BQ04 359 aaKnown RBP9.17□□□□□ -0.94
PDPN-212ENST00000621990 INPP5KQ9BT40 448 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 RBM4Q9BWF3 364 aaKnown RBP9.17□□□□□ -0.94
PDPN-212ENST00000621990 TOR3AQ9H497 397 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 CXorf21Q9HAI6 301 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 HPS4Q9NQG7 708 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 TMEM39AQ9NV64 488 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 SLC22A14Q9Y267 594 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 ADH1AP07327 375 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 GSTM1P09488 218 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 PRPS1L1P21108 318 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 VIPR1P32241 457 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 CDKN2CP42773 168 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 NUP107P57740 925 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 GSTM4Q03013 218 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 GRSF1Q12849 480 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDPN-212ENST00000621990 DPY19L1Q2PZI1 675 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 RBM48Q5RL73 367 aaKnown RBP9.17□□□□□ -0.94
PDPN-212ENST00000621990 HENMT1Q5T8I9 393 aaKnown RBP9.17□□□□□ -0.94
PDPN-212ENST00000621990 NOXRED1Q6NXP6 359 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 SERPINA13PQ6UXR4 307 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 KCTD8Q6ZWB6 473 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 DET1Q7L5Y6 550 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 ZNF551Q7Z340 670 aaPredicted RBP9.17□□□□□ -0.94
PDPN-212ENST00000621990 HSD11B1LQ7Z5J1 315 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 THAP5Q7Z6K1 395 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 ADHFE1Q8IWW8 467 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 CLEC4FQ8N1N0 589 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 KREMEN2Q8NCW0 462 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 WDR20Q8TBZ3 569 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 MCOLN3Q8TDD5 553 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 NETO1Q8TDF5 533 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 FRS2Q8WU20 508 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 C12orf43Q96C57 262 aaKnown RBP9.17□□□□□ -0.94
PDPN-212ENST00000621990 SDCCAG3Q96C92 435 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 METTL2AQ96IZ6 378 aaKnown RBP9.17□□□□□ -0.94
PDPN-212ENST00000621990 CORO1BQ9BR76 489 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 AMBRA1Q9C0C7 1298 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 LIN28AQ9H9Z2 209 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms