RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 ZNF75DP51815 510 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 GSDMDP57764 484 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CETN1Q12798 172 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 FOXF2Q12947 444 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 TNK1Q13470 666 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 KARSQ15046 597 aaKnown RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 RPS6KA1Q15418 735 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 TRADDQ15628 312 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CEBPEQ15744 281 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SGCBQ16585 318 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 LACTB2Q53H82 288 aaPredicted RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 TOR1AIP1Q5JTV8 583 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CYB5D1Q6P9G0 228 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 KCTD18Q6PI47 426 aaPredicted RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CRIP3Q6Q6R5 217 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 PARM1Q6UWI2 310 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 Q6ZTK2 550 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 Q75L30 129 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 ARHGAP22Q7Z5H3 698 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 YTHDF3Q7Z739 585 aaKnown RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CTAGE6Q86UF2 777 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 PALB2Q86YC2 1186 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SERPINA12Q8IW75 414 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CCDC83Q8IWF9 413 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CTAGE4Q8IX94 777 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 AQP12AQ8IXF9 295 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 TIGD4Q8IY51 512 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 GCSAMQ8N6F7 178 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 RTL3Q8N8U3 475 aaKnown RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 OR52M1Q8NGK5 317 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 RIT1Q92963 219 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CAMK1GQ96NX5 476 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 NACA2Q9H009 215 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 ABCG8Q9H221 673 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 FOXP1Q9H334 677 aaPredicted RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 FN3KQ9H479 309 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 GORASP2Q9H8Y8 452 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 EXOC1Q9NV70 894 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 TMOD2Q9NZR1 351 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SNX7Q9UNH6 387 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CHTOPQ9Y3Y2 248 aaKnown RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SPAG9O60271 1321 aaKnown RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 ZMYM2Q9UBW7 1377 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 A0A1B0GVT2 93 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SYCE3A1L190 88 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 C5orf60A6NFR6 353 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 TMEM191CA6NGB0 347 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 NCF1BA6NI72 391 aaPredicted RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 NCF1CA8MVU1 366 aaPredicted RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 E5RJQ4 531 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CXCL11O14625 94 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 MATN3O15232 486 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 PPIP5K2O43314 1243 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 NOL3O60936 208 aaKnown RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 ERLIN1O75477 346 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 ALPPP05187 535 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CSN3P07498 182 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 POLR2MP0CAP2 368 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 ALPPL2P10696 532 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 ACP2P11117 423 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CCND3P30281 292 aaPredicted RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 STX2P32856 288 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 NR2C2P49116 596 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 ETV1P50549 477 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 PLCD1P51178 756 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 HADHBP55084 474 aaKnown RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 UCP2P55851 309 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CTAG1AP78358 180 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 ST3GAL1Q11201 340 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SNX1Q13596 522 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SPATS1Q496A3 300 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 KCTD21Q4G0X4 260 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 LRRC73Q5JTD7 316 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SPDYCQ5MJ68 293 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 GRTP1Q5TC63 336 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 FAM69BQ5VUD6 431 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 PRAMEF8Q5VWM4 474 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 ZNF772Q68DY9 489 aaPredicted RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SLC18B1Q6NT16 456 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 PIGWQ7Z7B1 504 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 PIP4P1Q86T03 277 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 ARHGAP24Q8N264 748 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 BBOF1Q8ND07 529 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 OR52I2Q8NH67 350 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SPATA22Q8NHS9 363 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 C9orf43Q8TAL5 461 aaPredicted RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SMPDL3BQ92485 455 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SYN2Q92777 582 aaPredicted RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 DAZLQ92904 295 aaKnown RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SLAMF9Q96A28 289 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 KLHL5Q96PQ7 755 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 EGFL8Q99944 293 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 DDX50Q9BQ39 737 aaKnown RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 CAPS2Q9BXY5 557 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 DPH5Q9H2P9 285 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 C17orf75Q9HAS0 396 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 HHATLQ9HCP6 504 aa3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SMPD3Q9NY59 655 aaPredicted RBP3.67□□□□□ -1.82
LRRC39-204ENST00000620882 SRPRBQ9Y5M8 271 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms