RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 ZNF480Q8WV37 535 aa17.64■□□□□ 0.41
LITAF-220ENST00000620789 KLHL25Q9H0H3 589 aa17.64■□□□□ 0.41
LITAF-220ENST00000620789 PARVBQ9HBI1 364 aa17.64■□□□□ 0.41
LITAF-220ENST00000620789 PDE7BQ9NP56 450 aa17.64■□□□□ 0.41
LITAF-220ENST00000620789 FGF21Q9NSA1 209 aa17.64■□□□□ 0.41
LITAF-220ENST00000620789 A0A1W2PPV9 198 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 SRRM3A6NNA2 597 aaPredicted RBP17.63■□□□□ 0.41
LITAF-220ENST00000620789 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.63■□□□□ 0.41
LITAF-220ENST00000620789 RRP8O43159 456 aaKnown RBP17.63■□□□□ 0.41
LITAF-220ENST00000620789 MAP3K7O43318 606 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 FKBP9O95302 570 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 WISP3O95389 354 aaPredicted RBP17.63■□□□□ 0.41
LITAF-220ENST00000620789 SLU7O95391 586 aaKnown RBP17.63■□□□□ 0.41
LITAF-220ENST00000620789 FGF5P12034 268 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 STMN1P16949 149 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 TNFRSF8P28908 595 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 DEKP35659 375 aaKnown RBP17.63■□□□□ 0.41
LITAF-220ENST00000620789 PNLIPRP1P54315 467 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 TUBB4BP68371 445 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 SF1Q15637 639 aaKnown RBP17.63■□□□□ 0.41
LITAF-220ENST00000620789 ZKSCAN8Q15776 578 aaPredicted RBP17.63■□□□□ 0.41
LITAF-220ENST00000620789 PHKG1Q16816 387 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 TRMT10CQ7L0Y3 403 aaKnown RBP17.63■□□□□ 0.41
LITAF-220ENST00000620789 GSPT2Q8IYD1 628 aaKnown RBP17.63■□□□□ 0.41
LITAF-220ENST00000620789 ANKRD49Q8WVL7 239 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 KCNE4Q8WWG9 221 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 SMPDL3AQ92484 453 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 ANKRD7Q92527 254 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 MRRFQ96E11 262 aaKnown RBP17.63■□□□□ 0.41
LITAF-220ENST00000620789 CCDC138Q96M89 665 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 DCBLD2Q96PD2 775 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 ANKZF1Q9H8Y5 726 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 ZFHX4Q86UP3 3567 aa17.63■□□□□ 0.41
LITAF-220ENST00000620789 A0A087WUV0 522 aaPredicted RBP17.62■□□□□ 0.41
LITAF-220ENST00000620789 A0A087WV48 116 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 E7ENX8 843 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 STMND1H3BQB6 276 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 PHGDHO43175 533 aaKnown RBP17.62■□□□□ 0.41
LITAF-220ENST00000620789 MSL3P1P0C860 447 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 MYBL2P10244 700 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 MAGP20916 626 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 PSMB5P28074 263 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 IMPA1P29218 277 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 PMS2P54278 862 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 RAB10P61026 200 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 TAP2Q03519 686 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 GPR19Q15760 415 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 ZIC1Q15915 447 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 UAP1Q16222 522 aaPredicted RBP17.62■□□□□ 0.41
LITAF-220ENST00000620789 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.62■□□□□ 0.41
LITAF-220ENST00000620789 BPHLQ86WA6 291 aaPredicted RBP17.62■□□□□ 0.41
LITAF-220ENST00000620789 ZFAND4Q86XD8 727 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 PPP1R3BQ86XI6 285 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 FAM20CQ8IXL6 584 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 SYTL1Q8IYJ3 562 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 OR2A1Q8NGT9 310 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 TCTN2Q96GX1 697 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 NAF1Q96HR8 494 aaKnown RBP17.62■□□□□ 0.41
LITAF-220ENST00000620789 TXLNGYQ9BZA5 131 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 DPH1Q9BZG8 443 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 CHRNA10Q9GZZ6 450 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.62■□□□□ 0.41
LITAF-220ENST00000620789 IKZF3Q9UKT9 509 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 RARRES3Q9UL19 164 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 LAMA5O15230 3695 aa17.62■□□□□ 0.41
LITAF-220ENST00000620789 PABPN1LA6NDY0 278 aaKnown RBP17.61■□□□□ 0.41
LITAF-220ENST00000620789 SNRNP200O75643 2136 aaKnown RBP17.61■□□□□ 0.41
LITAF-220ENST00000620789 ABHD2P08910 425 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 ENO2P09104 434 aaPredicted RBP17.61■□□□□ 0.41
LITAF-220ENST00000620789 HIST1H2AGP0C0S8 130 aaPredicted RBP17.61■□□□□ 0.41
LITAF-220ENST00000620789 LIPCP11150 499 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 HIST1H2ADP20671 130 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 AP1S2P56377 157 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 SUSD1Q6UWL2 747 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 SBSNQ6UWP8 590 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 CDHR3Q6ZTQ4 885 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 DTX1Q86Y01 620 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 LRRC56Q8IYG6 542 aaPredicted RBP17.61■□□□□ 0.41
LITAF-220ENST00000620789 PPFIBP2Q8ND30 876 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 OR2L3Q8NG85 312 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 OR8K5Q8NH50 307 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 UHMK1Q8TAS1 419 aaKnown RBP17.61■□□□□ 0.41
LITAF-220ENST00000620789 SLC44A1Q8WWI5 657 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 ZNF501Q96CX3 271 aaPredicted RBP17.61■□□□□ 0.41
LITAF-220ENST00000620789 HIST1H2AHQ96KK5 128 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 PAFAH2Q99487 392 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 HIST1H2AJQ99878 128 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 H2AFJQ9BTM1 129 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 TRIM54Q9BYV2 358 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 SPRY4Q9C004 299 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 FANCEQ9HB96 536 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 FAM60AQ9NP50 221 aa17.61■□□□□ 0.41
LITAF-220ENST00000620789 INTS7Q9NVH2 962 aaKnown RBP17.61■□□□□ 0.41
LITAF-220ENST00000620789 STOX2Q9P2F5 926 aaPredicted RBP17.61■□□□□ 0.41
LITAF-220ENST00000620789 NOVA2Q9UNW9 492 aaKnown RBP17.61■□□□□ 0.41
LITAF-220ENST00000620789 SDK2Q58EX2 2172 aa17.6■□□□□ 0.41
LITAF-220ENST00000620789 NPEPPSL1A6NEC2 478 aa17.6■□□□□ 0.41
LITAF-220ENST00000620789 CDC7O00311 574 aa17.6■□□□□ 0.41
LITAF-220ENST00000620789 RIPK2O43353 540 aa17.6■□□□□ 0.41
LITAF-220ENST00000620789 STK17BO94768 372 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms