RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 RHBDF1Q96CC6 855 aa13.19□□□□□ -0.3
NEK3-210ENST00000620675 GFM1Q96RP9 751 aaKnown RBP13.19□□□□□ -0.3
NEK3-210ENST00000620675 TMEM79Q9BSE2 394 aa13.19□□□□□ -0.3
NEK3-210ENST00000620675 TMBIM4Q9HC24 238 aa13.19□□□□□ -0.3
NEK3-210ENST00000620675 NOVA2Q9UNW9 492 aaKnown RBP13.19□□□□□ -0.3
NEK3-210ENST00000620675 FAM149AA5PLN7 773 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 A8MU76 341 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 SUPT3HB4E1H0 165 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 TARM1B6A8C7 271 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 DUX1O43812 170 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 SUPT3HO75486 399 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 CPNE6O95741 557 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 COL6A2P12110 1019 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 SHMT2P34897 504 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 GPLD1P80108 840 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 NAE1Q13564 534 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 COL9A2Q14055 689 aaPredicted RBP13.18□□□□□ -0.3
NEK3-210ENST00000620675 FAM219BQ5XKK7 198 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 STAG3L4Q8TBR4 150 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 MAGEC3Q8TD91 643 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 PGM2Q96G03 612 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 CABS1Q96KC9 395 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 CCDC138Q96M89 665 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 OR2A14Q96R47 310 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 MAP3K3Q99759 626 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 EGFL8Q99944 293 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 INTS7Q9NVH2 962 aaKnown RBP13.18□□□□□ -0.3
NEK3-210ENST00000620675 ACTR10Q9NZ32 417 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 OR6C2Q9NZP2 312 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 SLC17A7Q9P2U7 560 aa13.18□□□□□ -0.3
NEK3-210ENST00000620675 PIPSLA2A3N6 862 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 PMS2P1A4D2B8 440 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 HIST1H2AGP0C0S8 130 aaPredicted RBP13.17□□□□□ -0.3
NEK3-210ENST00000620675 MYZAPP0CAP1 466 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 UGT2B7P16662 529 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 HIST1H2ADP20671 130 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 PRDX3P30048 256 aaKnown RBP13.17□□□□□ -0.3
NEK3-210ENST00000620675 TBPL1P62380 186 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 SPIDRQ14159 915 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 MPP2Q14168 576 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 TTMPQ5BVD1 217 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 HES3Q5TGS1 186 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 ANKS6Q68DC2 871 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 RPS27LQ71UM5 84 aaKnown RBP13.17□□□□□ -0.3
NEK3-210ENST00000620675 CCDC91Q7Z6B0 441 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 OOSP2Q86WS3 158 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 RHEBL1Q8TAI7 183 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 MED8Q96G25 268 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 HIST1H2AHQ96KK5 128 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 OR4K3Q96R72 315 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 HIST1H2AJQ99878 128 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 H2AFJQ9BTM1 129 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 ZMYND15Q9H091 742 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 CD274Q9NZQ7 290 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 PCDHGA1Q9Y5H4 931 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 FER1L5A0AVI2 2057 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 DMXL2Q8TDJ6 3036 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 SCN3AQ9NY46 2000 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 IGHV5-51A0A0C4DH38 117 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 IGHV5-10-1A0A0J9YXX1 117 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 ISM1B1AKI9 464 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 COPEO14579 308 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 ENO2P09104 434 aaPredicted RBP13.17□□□□□ -0.3
NEK3-210ENST00000620675 HSPA7P48741 367 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 AP1S2P56377 157 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 PTCHD3Q3KNS1 767 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 SLITRK4Q8IW52 837 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 CHCHD4Q8N4Q1 142 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 OR2A1Q8NGT9 310 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 FBXL8Q96CD0 374 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 PHF21BQ96EK2 531 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 RUFY1Q96T51 708 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 MIPEPQ99797 713 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 SPATA7Q9P0W8 599 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 LNPEPQ9UIQ6 1025 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 POMT2Q9UKY4 750 aa13.17□□□□□ -0.3
NEK3-210ENST00000620675 TYROBPO43914 113 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 SIX3O95343 332 aaPredicted RBP13.16□□□□□ -0.3
NEK3-210ENST00000620675 PROCP04070 461 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 CRHR1P34998 444 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 SEPHS1P49903 392 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 MN1Q10571 1320 aaPredicted RBP13.16□□□□□ -0.3
NEK3-210ENST00000620675 ILKQ13418 452 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 SQSTM1Q13501 440 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 PFKFB4Q16877 469 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 TSNAXIP1Q2TAA8 658 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 CDCP2Q5VXM1 449 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 KIAA1614Q5VZ46 1190 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 KLC3Q6P597 504 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 WDR74Q6RFH5 385 aaPredicted RBP13.16□□□□□ -0.3
NEK3-210ENST00000620675 PDPRQ8NCN5 879 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 HMGCLL1Q8TB92 370 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 TLCD1Q96CP7 247 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 APOPT1Q96IL0 206 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 MRPL57Q9BQC6 102 aaKnown RBP13.16□□□□□ -0.3
NEK3-210ENST00000620675 TRIM54Q9BYV2 358 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 MRPL46Q9H2W6 279 aaKnown RBP13.16□□□□□ -0.3
NEK3-210ENST00000620675 VIPAS39Q9H9C1 493 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 TAC3Q9UHF0 121 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 PTBP2Q9UKA9 531 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms