RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PKMP14618 531 aaKnown RBP16.49■□□□□ 0.23
HMGN3-203ENST00000620514 ADARP55265 1226 aaKnown RBP16.49■□□□□ 0.23
HMGN3-203ENST00000620514 IGFBP7Q16270 282 aa16.49■□□□□ 0.23
HMGN3-203ENST00000620514 ARMC3Q5W041 872 aa16.49■□□□□ 0.23
HMGN3-203ENST00000620514 ZNF470Q6ECI4 717 aa16.49■□□□□ 0.23
HMGN3-203ENST00000620514 DENND6AQ8IWF6 608 aa16.49■□□□□ 0.23
HMGN3-203ENST00000620514 NAT8LQ8N9F0 302 aa16.49■□□□□ 0.23
HMGN3-203ENST00000620514 ACTRT1Q8TDG2 376 aa16.49■□□□□ 0.23
HMGN3-203ENST00000620514 FOPNLQ96NB1 174 aa16.49■□□□□ 0.23
HMGN3-203ENST00000620514 SLC30A3Q99726 388 aa16.49■□□□□ 0.23
HMGN3-203ENST00000620514 RAB11FIP5Q9BXF6 653 aa16.49■□□□□ 0.23
HMGN3-203ENST00000620514 XAB2Q9HCS7 855 aaKnown RBP16.49■□□□□ 0.23
HMGN3-203ENST00000620514 FBXO6Q9NRD1 293 aaPredicted RBP16.49■□□□□ 0.23
HMGN3-203ENST00000620514 A0A1W2PPV9 198 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 PFDN6O15212 129 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 ZSCAN12O43309 604 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 KIF5CO60282 957 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 NRP2O60462 931 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 MATN4O95460 622 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 MCM3P25205 808 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 OTX2P32243 289 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 MAGEA3P43357 314 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 GCGRP47871 477 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 YBX1P67809 324 aaKnown RBP16.48■□□□□ 0.23
HMGN3-203ENST00000620514 DCDP81605 110 aaKnown RBP16.48■□□□□ 0.23
HMGN3-203ENST00000620514 CTBP1Q13363 440 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 ATP1A4Q13733 1029 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 FASTKQ14296 549 aaKnown RBP16.48■□□□□ 0.23
HMGN3-203ENST00000620514 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.48■□□□□ 0.23
HMGN3-203ENST00000620514 TEX19Q8NA77 164 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 PROKR1Q8TCW9 393 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 SIGLEC10Q96LC7 697 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 MIPEPQ99797 713 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 NDC1Q9BTX1 674 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 SLC25A23Q9BV35 468 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 SLC22A11Q9NSA0 550 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 TXLNGQ9NUQ3 528 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 INTS10Q9NVR2 710 aaKnown RBP16.48■□□□□ 0.23
HMGN3-203ENST00000620514 IFT80Q9P2H3 777 aaPredicted RBP16.48■□□□□ 0.23
HMGN3-203ENST00000620514 SNX12Q9UMY4 172 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 SRPK3Q9UPE1 567 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 MAD1L1Q9Y6D9 718 aa16.48■□□□□ 0.23
HMGN3-203ENST00000620514 FLNBO75369 2602 aaKnown RBP16.48■□□□□ 0.23
HMGN3-203ENST00000620514 MAGEB16A2A368 324 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 CTAGE9A4FU28 777 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 ARHGEF33A8MVX0 844 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 E5RI56 91 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 CTSVO60911 334 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 ITGAXP20702 1163 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 ATP5DP30049 168 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 CCNFP41002 786 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 FNTAP49354 379 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 CLCN7P51798 805 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 FOXK1P85037 733 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 THOC5Q13769 683 aaKnown RBP16.47■□□□□ 0.23
HMGN3-203ENST00000620514 KLHL38Q2WGJ6 581 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 NKAIN1Q4KMZ8 207 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 RNASEH2BQ5TBB1 312 aaKnown RBP16.47■□□□□ 0.23
HMGN3-203ENST00000620514 ZNF549Q6P9A3 640 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 GIMAP7Q8NHV1 300 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 HMGCLL1Q8TB92 370 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 GRK7Q8WTQ7 553 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 DHRS4Q9BTZ2 278 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 MLXIPLQ9NP71 852 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 INTS7Q9NVH2 962 aaKnown RBP16.47■□□□□ 0.23
HMGN3-203ENST00000620514 SPATA7Q9P0W8 599 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 NDOR1Q9UHB4 597 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 GPN3Q9UHW5 284 aaPredicted RBP16.47■□□□□ 0.23
HMGN3-203ENST00000620514 PADI2Q9Y2J8 665 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 MED16Q9Y2X0 877 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 PTRH2Q9Y3E5 179 aaKnown RBP16.47■□□□□ 0.23
HMGN3-203ENST00000620514 MRFAP1Q9Y605 127 aa16.47■□□□□ 0.23
HMGN3-203ENST00000620514 CCDC88CQ9P219 2028 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 GOLGA6L10A0A0M3HER8 536 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 A6NL46 340 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 CEACAM4O75871 244 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 USP1O94782 785 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 ALAS2P22557 587 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 SLC1A2P43004 574 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 PGDP52209 483 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 CUL1Q13616 776 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 CYP2A13Q16696 494 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 ZC3H12BQ5HYM0 836 aaKnown RBP16.46■□□□□ 0.23
HMGN3-203ENST00000620514 MRPL14Q6P1L8 145 aaKnown RBP16.46■□□□□ 0.23
HMGN3-203ENST00000620514 TTLL10Q6ZVT0 673 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 RAB43Q86YS6 212 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 PPIL6Q8IXY8 311 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 RAB42Q8N4Z0 105 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 FDCSPQ8NFU4 85 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 OR2L3Q8NG85 312 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 OR2A1Q8NGT9 310 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 C17orf62Q9BQA9 187 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 DDX47Q9H0S4 455 aaKnown RBP16.46■□□□□ 0.23
HMGN3-203ENST00000620514 C20orf96Q9NUD7 363 aaPredicted RBP16.46■□□□□ 0.23
HMGN3-203ENST00000620514 PLAAQ9Y263 795 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 VPS9D1Q9Y2B5 631 aa16.46■□□□□ 0.23
HMGN3-203ENST00000620514 PCDHGA9Q9Y5G4 932 aaKnown RBP16.46■□□□□ 0.23
HMGN3-203ENST00000620514 ASH1LQ9NR48 2969 aaKnown RBP16.46■□□□□ 0.23
HMGN3-203ENST00000620514 USP27XA6NNY8 438 aa16.45■□□□□ 0.22
HMGN3-203ENST00000620514 TARM1B6A8C7 271 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms