RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 KERAO60938 352 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 SULT1C4O75897 302 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 GOT2P00505 430 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 HPRP00739 348 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 NPPAP01160 153 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 RHOP08100 348 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 CD1DP15813 335 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 CLCN4P51793 760 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 OR4D2P58180 307 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 GRIK2Q13002 908 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 TSNQ15631 228 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 RSBN1Q5VWQ0 802 aaPredicted RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 KANK2Q63ZY3 851 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 NEK10Q6ZWH5 1172 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 ANKRD13BQ86YJ7 626 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 DCBLD1Q8N8Z6 715 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 SH3RF2Q8TEC5 729 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 EXOC2Q96KP1 924 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 UBXN10Q96LJ8 280 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 CGREF1Q99674 301 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 NEURL2Q9BR09 285 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 SLC46A2Q9BY10 475 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 INTS7Q9NVH2 962 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 AP3M1Q9Y2T2 418 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 PCDHA9Q9Y5H5 950 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 CORINQ9Y5Q5 1042 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 CROCCQ5TZA2 2017 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 NPEPPSL1A6NEC2 478 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 BNIP3LO60238 219 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 ADAM23O75077 832 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 RPP40O75818 363 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF682O95780 498 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 FTH1P02794 183 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 SERPINF2P08697 491 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 PIRTP0C851 137 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 JUNBP17275 347 aaPredicted RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 CRHBPP24387 322 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 FOXA1P55317 472 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 GABARAPL2P60520 117 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 ADARB1P78563 741 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 PIGFQ07326 219 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 IL10RBQ08334 325 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 KCNAB2Q13303 367 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 RCAN2Q14206 197 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 SGO1Q5FBB7 561 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 PAGE3Q5JUK9 113 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 SULT1C3Q6IMI6 304 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 LRRC69Q6ZNQ3 347 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 PRR23BQ6ZRT6 265 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 FKBP9P1Q75LS8 142 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 PIWIL3Q7Z3Z3 882 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 HIPK1Q86Z02 1210 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 BBS7Q8IWZ6 715 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF683Q8IZ20 524 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 PNPLA1Q8N8W4 532 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 HJURPQ8NCD3 748 aaPredicted RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 PTERQ96BW5 349 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 SEMA3CQ99985 751 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 CINPQ9BW66 212 aaPredicted RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 TDRD1Q9BXT4 1180 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 POLR1EQ9GZS1 481 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 MAGEH1Q9H213 219 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 CCNB1IP1Q9NPC3 277 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 INIPQ9NRY2 104 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 UBA2Q9UBT2 640 aaPredicted RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 GMPPBQ9Y5P6 360 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 HCFC2Q9Y5Z7 792 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 PTPRDP23468 1912 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 C2orf81A6NN90 581 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 FXYD1O00168 92 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 PPP6CO00743 305 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 ACOX3O15254 700 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 RAD51BO15315 384 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 FKBP9O95302 570 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 S1PR4O95977 384 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 FGF1P05230 155 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF37AP17032 561 aaPredicted RBP6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 HLA-DPA1P20036 260 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 SHMT2P34897 504 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 GRK3P35626 688 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 NRIP1P48552 1158 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 SGSHP51688 502 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 IL2P60568 153 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 PSMA6P60900 246 aaKnown RBP6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 MAD2L1Q13257 205 aaPredicted RBP6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 ZRANB3Q5FWF4 1079 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 DENND5AQ6IQ26 1287 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF549Q6P9A3 640 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 LINGO4Q6UY18 593 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 GCNT7Q6ZNI0 430 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 SLC22A16Q86VW1 577 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 ATG16L2Q8NAA4 619 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 OR10A6Q8NH74 314 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 RHEBL1Q8TAI7 183 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 SMG7Q92540 1137 aaKnown RBP6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 ALPK1Q96QP1 1244 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 ACOX2Q99424 681 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 NKX2-4Q9H2Z4 354 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 FAM118AQ9NWS6 357 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 DNMT3BQ9UBC3 853 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms