RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 GMPRP36959 345 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 EIF2S3P41091 472 aaKnown RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 TSPAN7P41732 249 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 HALP42357 657 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 NSG1P42857 185 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 MAPK9P45984 424 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CD151P48509 253 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 SERPINB4P48594 390 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 HK2P52789 917 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 ARFIP2P53365 341 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 LIMK2P53671 638 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 PRKAA2P54646 552 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CSE1LP55060 971 aaKnown RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 WDR4P57081 412 aaKnown RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 OR1D5P58170 312 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CFHR1Q03591 330 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 MPP2Q14168 576 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 FRG1Q14331 258 aaKnown RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 GBX1Q14549 363 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 TMED2Q15363 201 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 RPE65Q16518 533 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CRTC2Q53ET0 693 aaPredicted RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 AARS2Q5JTZ9 985 aaKnown RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 METTL21CQ5VZV1 264 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 METRNLQ641Q3 311 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CAPRIN2Q6IMN6 1127 aaKnown RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 TMEM71Q6P5X7 295 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 TMPRSS9Q7Z410 1059 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 SPRED1Q7Z699 444 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 AMZ2Q86W34 360 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 KMT5CQ86Y97 462 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CFAP206Q8IYR0 622 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 KIRREL3Q8IZU9 778 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CYP4X1Q8N118 509 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 LMNTD1Q8N9Z9 388 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 OR2L2Q8NH16 312 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 OR8K5Q8NH50 307 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 OR10G6Q8NH81 332 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 GSDMBQ8TAX9 411 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 SLC44A1Q8WWI5 657 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 STON2Q8WXE9 905 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 JPH3Q8WXH2 748 aaPredicted RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CDKL2Q92772 493 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CCDC74AQ96AQ1 378 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 FAM136AQ96C01 138 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 MIEF2Q96C03 454 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CERS2Q96G23 380 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 DCUN1D1Q96GG9 259 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 ZDHHC12Q96GR4 267 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 FCRL4Q96PJ5 515 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CD180Q99467 661 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 DDA1Q9BW61 102 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 TSSK1BQ9BXA7 367 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 WWP1Q9H0M0 922 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 VCX3BQ9H321 246 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 LRRN3Q9H3W5 708 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 OSGEPL1Q9H4B0 414 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 COG4Q9H9E3 785 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 RNPEPL1Q9HAU8 725 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 DCDC2Q9UHG0 476 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 BCAP29Q9UHQ4 241 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 ZFP69BQ9UJL9 534 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 GRID1Q9ULK0 1009 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CORO1CQ9ULV4 474 aaPredicted RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 VPS9D1Q9Y2B5 631 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CRYL1Q9Y2S2 319 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CFAP20Q9Y6A4 193 aaKnown RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 AK5Q9Y6K8 562 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 COLEC10Q9Y6Z7 277 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 FLNBO75369 2602 aaKnown RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 GOLGA8QA0A0J9YX86 632 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 TEX51A0A1B0GUA7 166 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 A0A1W2PNU3 283 aaPredicted RBP5.1□□□□□ -1.59
SHMT1-211ENST00000618902 UBA6A0AVT1 1052 aaPredicted RBP5.1□□□□□ -1.59
SHMT1-211ENST00000618902 HMX2A2RU54 273 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 PMS2P1A4D2B8 440 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 GOLGA8OA6NCC3 632 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 PDZK1P1A8MUH7 402 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 C1QTNF9BB2RNN3 333 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 GOLGA8NF8WBI6 632 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 MAP3K7O43318 606 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 FKBP6O75344 327 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 H2AFYO75367 372 aaKnown RBP5.1□□□□□ -1.59
SHMT1-211ENST00000618902 CSO75390 466 aaKnown RBP5.1□□□□□ -1.59
SHMT1-211ENST00000618902 FKBP9O95302 570 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 WISP3O95389 354 aaPredicted RBP5.1□□□□□ -1.59
SHMT1-211ENST00000618902 C1QTNF9P0C862 333 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 SFTPCP11686 197 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 PKMP14618 531 aaKnown RBP5.1□□□□□ -1.59
SHMT1-211ENST00000618902 SPINK2P20155 84 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 GCAP28676 217 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 ADSLP30566 484 aaPredicted RBP5.1□□□□□ -1.59
SHMT1-211ENST00000618902 CSF2RBP32927 897 aa5.1□□□□□ -1.59
SHMT1-211ENST00000618902 RPA3P35244 121 aaPredicted RBP5.1□□□□□ -1.59
SHMT1-211ENST00000618902 LEPRP48357 1165 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms