RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 MAGEC1O60732 1142 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 DKC1O60832 514 aaKnown RBP eCLIP2.3□□□□□ -2.04
TARDBP-220ENST00000618606 ENTPD3O75355 529 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 HSPA4LO95757 839 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 PRKACGP22612 351 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 PSMA4P25789 261 aaKnown RBP2.3□□□□□ -2.04
TARDBP-220ENST00000618606 NNMTP40261 264 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 EIF2DP41214 584 aaKnown RBP2.3□□□□□ -2.04
TARDBP-220ENST00000618606 STK4Q13043 487 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 PLA2G7Q13093 441 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 BMP2KLQ5H9B9 411 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 C20orf194Q5TEA3 1177 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 GKAP1Q5VSY0 366 aaPredicted RBP2.3□□□□□ -2.04
TARDBP-220ENST00000618606 KLHL35Q6PF15 583 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 NCEH1Q6PIU2 408 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 SLC25A47Q6Q0C1 308 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 TEX11Q8IYF3 940 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.3□□□□□ -2.04
TARDBP-220ENST00000618606 NUP37Q8NFH4 326 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 MIPOL1Q8TD10 442 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 SCFD2Q8WU76 684 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 MTERF3Q96E29 417 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 ELMOD3Q96FG2 381 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 C1orf74Q96LT6 269 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 PUS3Q9BZE2 481 aaKnown RBP2.3□□□□□ -2.04
TARDBP-220ENST00000618606 CPVLQ9H3G5 476 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 EHD2Q9NZN4 543 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 CHORDC1Q9UHD1 332 aaPredicted RBP2.3□□□□□ -2.04
TARDBP-220ENST00000618606 AMACRQ9UHK6 382 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 TMEM5Q9Y2B1 443 aa2.3□□□□□ -2.04
TARDBP-220ENST00000618606 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.3□□□□□ -2.04
TARDBP-220ENST00000618606 H7C0S8 307 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 GAPDHSO14556 408 aaPredicted RBP2.29□□□□□ -2.04
TARDBP-220ENST00000618606 TSPAN9O75954 239 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 CCNDBP1O95273 360 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 OR2C1O95371 312 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 VTNP04004 478 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 APOA4P06727 396 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 IGHV4-31P0DP07 118 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 CDH2P19022 906 aaPredicted RBP2.29□□□□□ -2.04
TARDBP-220ENST00000618606 PIK3R1P27986 724 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 PSMB10P40306 273 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 SNRPEP62304 92 aaKnown RBP2.29□□□□□ -2.04
TARDBP-220ENST00000618606 CX3CL1P78423 397 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 DLK1P80370 383 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 EPS8Q12929 822 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 KCNC3Q14003 757 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 MELKQ14680 651 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 TMEM266Q2M3C6 531 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 ZSCAN23Q3MJ62 389 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 RNF212Q495C1 297 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 HIGD2BQ4VC39 106 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 PDLIM3Q53GG5 364 aaPredicted RBP2.29□□□□□ -2.04
TARDBP-220ENST00000618606 BTN2A1Q7KYR7 527 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 CHST9Q7L1S5 443 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 DNAJB7Q7Z6W7 309 aaPredicted RBP2.29□□□□□ -2.04
TARDBP-220ENST00000618606 RPAP2Q8IXW5 612 aaPredicted RBP2.29□□□□□ -2.04
TARDBP-220ENST00000618606 Q8NFD4 153 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 SMAP2Q8WU79 429 aaPredicted RBP2.29□□□□□ -2.04
TARDBP-220ENST00000618606 ERLEC1Q96DZ1 483 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 CNDP2Q96KP4 475 aaKnown RBP2.29□□□□□ -2.04
TARDBP-220ENST00000618606 CMTM3Q96MX0 182 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 AGAP4Q96P64 663 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 ABHD1Q96SE0 405 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 BAG1Q99933 345 aaPredicted RBP2.29□□□□□ -2.04
TARDBP-220ENST00000618606 ANKRD2Q9GZV1 360 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 RSPH9Q9H1X1 276 aaPredicted RBP2.29□□□□□ -2.04
TARDBP-220ENST00000618606 SPHK2Q9NRA0 654 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 FGF21Q9NSA1 209 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 MAN2C1Q9NTJ4 1040 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 PAG1Q9NWQ8 432 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 CLIP2Q9UDT6 1046 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 CFDP1Q9UEE9 299 aaPredicted RBP2.29□□□□□ -2.04
TARDBP-220ENST00000618606 MTUS1Q9ULD2 1270 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 CMAHPQ9Y471 501 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 FAM169AQ9Y6X4 670 aa2.29□□□□□ -2.04
TARDBP-220ENST00000618606 ACOD1A6NK06 481 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 ASB14A6NK59 587 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 MYO1GB0I1T2 1018 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 UBE2CO00762 179 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 RNASEH1O60930 286 aaKnown RBP2.28□□□□□ -2.04
TARDBP-220ENST00000618606 NR2F1P10589 423 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 FOLR2P14207 255 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 SLC6A6P31641 620 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 CDH8P55286 799 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 DMPKQ09013 629 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 PSMD6Q15008 389 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 MTHFSDQ2M296 383 aaKnown RBP2.28□□□□□ -2.04
TARDBP-220ENST00000618606 RAB41Q5JT25 222 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 C1orf141Q5JVX7 400 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 LYSMD4Q5XG99 296 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 GPR139Q6DWJ6 353 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 KIAA0930Q6ICG6 404 aaPredicted RBP2.28□□□□□ -2.04
TARDBP-220ENST00000618606 NAA16Q6N069 864 aaPredicted RBP2.28□□□□□ -2.04
TARDBP-220ENST00000618606 KRT74Q7RTS7 529 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 SLC47A2Q86VL8 602 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 VSIG1Q86XK7 387 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 KRTAP11-1Q8IUC1 163 aa2.28□□□□□ -2.04
TARDBP-220ENST00000618606 ARID3BQ8IVW6 561 aaPredicted RBP2.28□□□□□ -2.04
TARDBP-220ENST00000618606 OR13J1Q8NGT2 312 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms