RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 USP7Q93009 1102 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 BTBD9Q96Q07 612 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 CCT7Q99832 543 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 SLC52A3Q9NQ40 469 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 ZNF490Q9ULM2 529 aaPredicted RBP20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 SH3BGRP55822 239 aaPredicted RBP20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 STX1BP61266 288 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 DYNC1I2Q13409 638 aaKnown RBP20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 LIN52Q52LA3 116 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 REP15Q6BDI9 236 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 KIAA1324Q6UXG2 1013 aaKnown RBP20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 RNF111Q6ZNA4 994 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 SPATA19Q7Z5L4 167 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 RETREG3Q86VR2 466 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 FNDC5Q8NAU1 212 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 NUDT8Q8WV74 236 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 MED8Q96G25 268 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 FOPNLQ96NB1 174 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 DPEP2Q9H4A9 486 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 RIC8BQ9NVN3 520 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 PRPF19Q9UMS4 504 aaKnown RBP20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 NDRG2Q9UN36 371 aaKnown RBP20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 PSMD13Q9UNM6 376 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 LATO43561 262 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 ULK1O75385 1050 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 IDO1P14902 403 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 CAPN3P20807 821 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 TEAD1P28347 426 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 NEK2P51955 445 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 LRP8Q14114 963 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 NR6A1Q15406 480 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 SMAD2Q15796 467 aaKnown RBP20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 ATP6AP1LQ52LC2 224 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 SFT2D3Q587I9 215 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 HPS6Q86YV9 775 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 OXR1Q8N573 874 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 L3MBTL4Q8NA19 623 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 OR56A3Q8NH54 315 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 CCDC124Q96CT7 223 aaKnown RBP20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 BRINP2Q9C0B6 783 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 EFCAB1Q9HAE3 211 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 FZD4Q9ULV1 537 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 TCRBV21S2A2A0A5A6 115 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 PDYNP01213 254 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 GABRG2P18507 467 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 RGS19P49795 217 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 UFM1P61960 85 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 AP5B1Q2VPB7 878 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 TRIM46Q7Z4K8 759 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 KBTBD6Q86V97 674 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 RGL4Q8IZJ4 473 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 FBXO15Q8NCQ5 510 aaPredicted RBP20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 FLCNQ8NFG4 579 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 NCSTNQ92542 709 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 SERPINI1Q99574 410 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 ACTL8Q9H568 366 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 PREBQ9HCU5 417 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 MRPL40Q9NQ50 206 aaKnown RBP20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 C2orf42Q9NWW7 574 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 MMP17Q9ULZ9 603 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 SCML1Q9UN30 329 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 CA5BQ9Y2D0 317 aa20.01■□□□□ 0.79
CNTNAP3B-212ENST00000617422 E7EQ34 232 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 NR5A2O00482 541 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 CEACAM5P06731 702 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 MYCLP1P12525 358 aaPredicted RBP20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 IL12AP29459 219 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 TPMTP51580 245 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 CHIT1Q13231 466 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 MAP7D1Q3KQU3 841 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 GGTA1PQ4G0N0 100 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 LPCAT4Q643R3 524 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 USP30Q70CQ3 517 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 RNF175Q8N4F7 328 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 SLC29A3Q9BZD2 475 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 WDR41Q9HAD4 459 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 MRGBPQ9NV56 204 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 C6orf203Q9P0P8 240 aaPredicted RBP20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 SH2B3Q9UQQ2 575 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 PLEKHM1Q9Y4G2 1056 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 CFAP20Q9Y6A4 193 aaKnown RBP20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 POM121BA6NF01 834 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 GLULP15104 373 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 PEX2P28328 305 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 GSTT1P30711 240 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 TRIP10Q15642 601 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 VPS26BQ4G0F5 336 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 METRNLQ641Q3 311 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 C16orf89Q6UX73 402 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 RNF165Q6ZSG1 346 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 PDZD3Q86UT5 571 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 KLHDC8AQ8IYD2 350 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 OR5AR1Q8NGP9 310 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 ACPTQ9BZG2 426 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 VCX3AQ9NNX9 186 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 PHPT1Q9NRX4 125 aaPredicted RBP20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 EBF1Q9UH73 591 aa20■□□□□ 0.79
CNTNAP3B-212ENST00000617422 NRP2O60462 931 aa19.99■□□□□ 0.79
CNTNAP3B-212ENST00000617422 G6PDP11413 515 aa19.99■□□□□ 0.79
CNTNAP3B-212ENST00000617422 SRFP11831 508 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms