RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 CKMT1AP12532 417 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 TNFRSF1BP20333 461 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 FDXRP22570 491 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 TNFSF8P32971 234 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 GRK5P34947 590 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 ADCYAP1R1P41586 468 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 HCAR3P49019 387 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 CSRP3P50461 194 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 SCNN1GP51170 649 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 ST3GAL4Q11206 333 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 MRPL28Q13084 256 aaKnown RBP6.52□□□□□ -1.37
LMO3-235ENST00000616247 BTBD16Q32M84 506 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 RUNDC3AQ59EK9 446 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 KIAA0319Q5VV43 1072 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 CPZQ66K79 652 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 OVOS1Q6IE37 1185 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 PRSS48Q7RTY5 328 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 CDH24Q86UP0 819 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 NOXA1Q86UR1 476 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 CACTIN-AS1Q8N1I8 211 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 DTX3Q8N9I9 347 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 AGBL3Q8NEM8 1001 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 DNAJB3Q8WWF6 145 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 GTF2H4Q92759 462 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 SNX18Q96RF0 628 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 INPP5KQ9BT40 448 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 AARSD1Q9BTE6 412 aaKnown RBP6.52□□□□□ -1.37
LMO3-235ENST00000616247 PCTPQ9UKL6 214 aa6.52□□□□□ -1.37
LMO3-235ENST00000616247 NRCAMQ92823 1304 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 TRAV19A0A0A6YYK7 116 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 ADM5C9JUS6 153 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 E9PAM4 449 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 TSPAN4O14817 238 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 RGS13O14921 159 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 AKR7A2O43488 359 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 ULK1O75385 1050 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 ERN1O75460 977 aaKnown RBP6.51□□□□□ -1.37
LMO3-235ENST00000616247 B3GAT3O94766 335 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 OPN1SWP03999 348 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 TSPAN19P0C672 248 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 CBLP22681 906 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 HOXA11P31270 313 aaPredicted RBP6.51□□□□□ -1.37
LMO3-235ENST00000616247 ADRA1AP35348 466 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 NPRL3Q12980 569 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 CSTF3Q12996 717 aaKnown RBP6.51□□□□□ -1.37
LMO3-235ENST00000616247 CAMK2GQ13555 558 aaPredicted RBP6.51□□□□□ -1.37
LMO3-235ENST00000616247 ARHGEF7Q14155 803 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 NFE2L1Q14494 772 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 CBX2Q14781 532 aaPredicted RBP6.51□□□□□ -1.37
LMO3-235ENST00000616247 PTPRRQ15256 657 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 SMYD5Q6GMV2 418 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 PTRHD1Q6GMV3 140 aaKnown RBP6.51□□□□□ -1.37
LMO3-235ENST00000616247 DPY19L3Q6ZPD9 716 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 DPP9Q86TI2 863 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 FAM20CQ8IXL6 584 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 IQCF2Q8IXL9 164 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 TIGD4Q8IY51 512 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 UBQLNLQ8IYU4 475 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 TMEM132CQ8N3T6 1108 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 ZMIZ2Q8NF64 920 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 FLCNQ8NFG4 579 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 GPR151Q8TDV0 419 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 NT5C3BQ969T7 300 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 GTPBP3Q969Y2 492 aaKnown RBP6.51□□□□□ -1.37
LMO3-235ENST00000616247 MYLPFQ96A32 169 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 TMCO6Q96DC7 493 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 CDKN2AIPNLQ96HQ2 116 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 CLSTN3Q9BQT9 956 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 UCK2Q9BZX2 261 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 NSUN3Q9H649 340 aaKnown RBP6.51□□□□□ -1.37
LMO3-235ENST00000616247 SLC52A3Q9NQ40 469 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 AASDHPPTQ9NRN7 309 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 DCAF13Q9NV06 445 aaKnown RBP6.51□□□□□ -1.37
LMO3-235ENST00000616247 THUMPD1Q9NXG2 353 aaKnown RBP6.51□□□□□ -1.37
LMO3-235ENST00000616247 MKLN1Q9UL63 735 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 ACTL7AQ9Y615 435 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 A0A1W2PQ09 198 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 OR2A25A4D2G3 310 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 DSCR3O14972 297 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 RGS14O43566 566 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 RPP40O75818 363 aaKnown RBP6.51□□□□□ -1.37
LMO3-235ENST00000616247 SLITRK5O94991 958 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 STAU1O95793 577 aaKnown RBP6.51□□□□□ -1.37
LMO3-235ENST00000616247 GLUD1P00367 558 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 PTHP01270 115 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 FABP3P05413 133 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 IL7P13232 177 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 CYP2A7P20853 494 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 ZNF135P52742 658 aaPredicted RBP6.51□□□□□ -1.37
LMO3-235ENST00000616247 EFEMP1Q12805 493 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 GBX1Q14549 363 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 QPRTQ15274 297 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 UAP1L1Q3KQV9 507 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 GNASQ5JWF2 1037 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 BRMS1LQ5PSV4 323 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 PXDC1Q5TGL8 231 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 PLET1Q6UQ28 207 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 LBX2Q6XYB7 198 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 GLT6D1Q7Z4J2 308 aa6.51□□□□□ -1.37
LMO3-235ENST00000616247 IFNL1Q8IU54 200 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms