RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 AARS2Q5JTZ9 985 aaKnown RBP19.93■□□□□ 0.78
TRAPPC3-208ENST00000616074 COX15Q7KZN9 410 aa19.93■□□□□ 0.78
TRAPPC3-208ENST00000616074 PPHLN1Q8NEY8 458 aaKnown RBP19.93■□□□□ 0.78
TRAPPC3-208ENST00000616074 TM9SF4Q92544 642 aa19.93■□□□□ 0.78
TRAPPC3-208ENST00000616074 PEX13Q92968 403 aa19.93■□□□□ 0.78
TRAPPC3-208ENST00000616074 FRMD8P1Q9BZ68 369 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC3-208ENST00000616074 SLC6A20Q9NP91 592 aa19.93■□□□□ 0.78
TRAPPC3-208ENST00000616074 CHRAC1Q9NRG0 131 aa19.93■□□□□ 0.78
TRAPPC3-208ENST00000616074 CATSPERZQ9NTU4 200 aa19.93■□□□□ 0.78
TRAPPC3-208ENST00000616074 INTS7Q9NVH2 962 aaKnown RBP19.93■□□□□ 0.78
TRAPPC3-208ENST00000616074 ERRFI1Q9UJM3 462 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC3-208ENST00000616074 ANAPC5Q9UJX4 755 aa19.93■□□□□ 0.78
TRAPPC3-208ENST00000616074 FBXL4Q9UKA2 621 aa19.93■□□□□ 0.78
TRAPPC3-208ENST00000616074 NOTCH2Q04721 2471 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 PRMT5O14744 637 aaPredicted RBP19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 DSCR3O14972 297 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 DDAH2O95865 285 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 ONECUT2O95948 504 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 APRTP07741 180 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 MMP11P24347 488 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 ITGA3P26006 1051 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 AIMP2Q13155 320 aaKnown RBP19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 SNX1Q13596 522 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 TMED2Q15363 201 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 SF1Q15637 639 aaKnown RBP19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 CRB2Q5IJ48 1285 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 FIGLAQ6QHK4 219 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 Q6ZS92 163 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 OVCH1Q7RTY7 1134 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 SLC13A5Q86YT5 568 aaPredicted RBP19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 ZADH2Q8N4Q0 377 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 SPSB2Q99619 263 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 CUTCQ9NTM9 273 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 CDC23Q9UJX2 597 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 SLC39A10Q9ULF5 831 aa19.92■□□□□ 0.78
TRAPPC3-208ENST00000616074 MDC1Q14676 2089 aaKnown RBP19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 SOCS6O14544 535 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 ALBP02768 609 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 ZSCAN5DPP0CG00 497 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 NKG7Q16617 165 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 ZC3H12BQ5HYM0 836 aaKnown RBP19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 CUZD1Q86UP6 607 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 CCDC89Q8N998 374 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 DENND1AQ8TEH3 1009 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 NACC2Q96BF6 587 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 ZNF285Q96NJ3 590 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 P2RY12Q9H244 342 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 SLC26A1Q9H2B4 701 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 WDR54Q9H977 334 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 PAK5Q9P286 719 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 NTNG1Q9Y2I2 539 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 PCDHGA10Q9Y5H3 936 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 CSAG2Q9Y5P2 127 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 HS3ST3B1Q9Y662 390 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 NFS1Q9Y697 457 aa19.91■□□□□ 0.78
TRAPPC3-208ENST00000616074 KRT87PA6NCN2 255 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 CD3EAPO15446 510 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 PRICKLE3O43900 615 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 PIM1P11309 404 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 PSMB5P28074 263 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 BDKRB1P46663 353 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 GLRBP48167 497 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 TTPAP49638 278 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 SESN2P58004 480 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 CRADDP78560 199 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 GRM7Q14831 915 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 CCSMST1Q4G0I0 132 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 TCTE1Q5JU00 501 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 PCID2Q5JVF3 399 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 YOD1Q5VVQ6 348 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 PRAMEF13Q5VWM6 474 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 PTRHD1Q6GMV3 140 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 SHISA6Q6ZSJ9 500 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 DTWD1Q8N5C7 304 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 RNF10Q8N5U6 811 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 METTL27Q8N6F8 245 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 TTC29Q8NA56 475 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 SELENOSQ9BQE4 189 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 RAB11FIP5Q9BXF6 653 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 SOX17Q9H6I2 414 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 ENAMQ9NRM1 1142 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 TREX1Q9NSU2 369 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 CTSFQ9UBX1 484 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 GNPTGQ9UJJ9 305 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 RUVBL2Q9Y230 463 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 COPG1Q9Y678 874 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 CENPEQ02224 2701 aa19.9■□□□□ 0.78
TRAPPC3-208ENST00000616074 CRYBG3Q68DQ2 2970 aa19.89■□□□□ 0.78
TRAPPC3-208ENST00000616074 ANKUB1A6NFN9 424 aa19.89■□□□□ 0.77
TRAPPC3-208ENST00000616074 WIPF3A6NGB9 483 aa19.89■□□□□ 0.77
TRAPPC3-208ENST00000616074 CTSVO60911 334 aa19.89■□□□□ 0.77
TRAPPC3-208ENST00000616074 C1orf105O95561 183 aa19.89■□□□□ 0.77
TRAPPC3-208ENST00000616074 LDLRP01130 860 aa19.89■□□□□ 0.77
TRAPPC3-208ENST00000616074 RPL22P35268 128 aaKnown RBP19.89■□□□□ 0.77
TRAPPC3-208ENST00000616074 OR1D4P47884 311 aa19.89■□□□□ 0.77
TRAPPC3-208ENST00000616074 KIRREL2Q6UWL6 708 aa19.89■□□□□ 0.77
TRAPPC3-208ENST00000616074 RAD51AP1Q96B01 352 aa19.89■□□□□ 0.77
TRAPPC3-208ENST00000616074 PANX3Q96QZ0 392 aa19.89■□□□□ 0.77
TRAPPC3-208ENST00000616074 BARD1Q99728 777 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms