RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 KIAA0319Q5VV43 1072 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 GOLGA7Q7Z5G4 137 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 RALGPS2Q86X27 583 aaPredicted RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 Q8N9G6 341 aaPredicted RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 PIK3C3Q8NEB9 887 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 TEX47Q8TBZ9 253 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 PRDM8Q9NQV8 689 aa9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 APOBEC3BQ9UH17 382 aaKnown RBP9.22□□□□□ -0.93
CLTCL1-208ENST00000615606 FAM221BA6H8Z2 402 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 MCIDASD6RGH6 385 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 SYPP08247 313 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 TCF3P15923 654 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 HOXA9P31269 272 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 NUDT1P36639 197 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 RABIFP47224 123 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 HNRNPKP61978 463 aaKnown RBP eCLIP9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC18A2Q05940 514 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 MRPL28Q13084 256 aaKnown RBP9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF234Q14588 700 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 TGFBIQ15582 683 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 TOR1AIP1Q5JTV8 583 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 AAGABQ6PD74 315 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 PAOXQ6QHF9 649 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 RTN4RL1Q86UN2 441 aaPredicted RBP9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 COX18Q8N8Q8 333 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 CHST14Q8NCH0 376 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 RTP4Q96DX8 246 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 PALMDQ9NP74 551 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 THUMPD1Q9NXG2 353 aaKnown RBP9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 GPR34Q9UPC5 381 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 A0A1W2PRB8 838 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 AGPSO00116 658 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 PSMD11O00231 422 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 SCELO95171 688 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 CHRNGP07510 517 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 PSMB9P28065 219 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 RGS8P57771 180 aaPredicted RBP9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 LGALS3BPQ08380 585 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 FAM174BQ3ZCQ3 159 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 ANKRD54Q6NXT1 300 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 RABEPKQ7Z6M1 372 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 CDK15Q96Q40 435 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 TPSD1Q9BZJ3 242 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 RNPEPL1Q9HAU8 725 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 CLN6Q9NWW5 311 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 HRASLS2Q9NWW9 162 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 GALPQ9UBC7 116 aa9.21□□□□□ -0.93
CLTCL1-208ENST00000615606 LAMA4Q16363 1823 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 DUXAA6NLW8 204 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 E7ESA3 106 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 CLPTM1O96005 669 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 CREB1P16220 341 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 ATP5A1P25705 553 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 AQP1P29972 269 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 PGDP52209 483 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 NCBP2P52298 156 aaKnown RBP eCLIP9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 PKDCCQ504Y2 493 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 MACC1Q6ZN28 852 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 RPLP0P6Q8NHW5 317 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 NXPE3Q969Y0 559 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 ART5Q96L15 291 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 CD244Q9BZW8 370 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 GMPPBQ9Y5P6 360 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 CLCA3PQ9Y6N3 262 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 A8MU76 341 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 SAP18O00422 153 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 CXCL10P02778 98 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 CYP17A1P05093 508 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 ZNF37AP17032 561 aaPredicted RBP9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 TYRP1P17643 537 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 HNRNPA2B1P22626 353 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 ITGB7P26010 798 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 SLC6A4P31645 630 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 ELF3P78545 371 aaPredicted RBP9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 BNC1Q01954 994 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 LIPEQ05469 1076 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 ARHGAP40Q5TG30 622 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 NEK5Q6P3R8 708 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 PAQR9Q6ZVX9 377 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 TMEM135Q86UB9 458 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 SLC30A8Q8IWU4 369 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 PEX5LQ8IYB4 626 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 LENG8Q96PV6 779 aaPredicted RBP9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 NEK6Q9HC98 313 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 ERVK-11Q9UQG0 969 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 CFL2Q9Y281 166 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 MYRFQ9Y2G1 1151 aa9.21□□□□□ -0.94
CLTCL1-208ENST00000615606 A0A0G2JN53 185 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 LOC730098B7Z3J9 87 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 MANBAO00462 879 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 TNFAIP8O95379 198 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 APBB3O95704 486 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 IFNGP01579 166 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 CCDC159P0C7I6 412 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 NRG3P56975 720 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 FAM78AQ5JUQ0 283 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 ZC3H14Q6PJT7 736 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 CYS1Q717R9 158 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 IGDCC3Q8IVU1 814 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 MCEMP1Q8IX19 187 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms