RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 SOX17Q9H6I2 414 aaPredicted RBP17.13■□□□□ 0.33
SMN2-213ENST00000614240 MRM3Q9HC36 420 aaKnown RBP17.13■□□□□ 0.33
SMN2-213ENST00000614240 NXT1Q9UKK6 140 aaKnown RBP17.13■□□□□ 0.33
SMN2-213ENST00000614240 NOVA2Q9UNW9 492 aaKnown RBP17.13■□□□□ 0.33
SMN2-213ENST00000614240 NTNG1Q9Y2I2 539 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 HIVEP3Q5T1R4 2406 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 IQCF5A8MTL0 148 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 ITGAXP20702 1163 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 ADRA1DP25100 572 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 MCM3P25205 808 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 CDC16Q13042 620 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 FAM214AQ32MH5 1076 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 TUBB8Q3ZCM7 444 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 AARS2Q5JTZ9 985 aaKnown RBP17.12■□□□□ 0.33
SMN2-213ENST00000614240 UNC5DQ6UXZ4 953 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 NLRP9Q7RTR0 991 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 METTL27Q8N6F8 245 aaPredicted RBP17.12■□□□□ 0.33
SMN2-213ENST00000614240 ACRBPQ8NEB7 543 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 OR2L8Q8NGY9 312 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 COG1Q8WTW3 980 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 SKA2Q8WVK7 121 aaPredicted RBP17.12■□□□□ 0.33
SMN2-213ENST00000614240 CARD6Q9BX69 1037 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 EPS8L2Q9H6S3 715 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 ETNK1Q9HBU6 452 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 REXO2Q9Y3B8 237 aaKnown RBP17.12■□□□□ 0.33
SMN2-213ENST00000614240 CSAG2Q9Y5P2 127 aa17.12■□□□□ 0.33
SMN2-213ENST00000614240 PRRC2CQ9Y520 2896 aaKnown RBP17.11■□□□□ 0.33
SMN2-213ENST00000614240 MYO9AB2RTY4 2548 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 SOCS6O14544 535 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 FTCDO95954 541 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 IFNB1P01574 187 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 STIP1P31948 543 aaKnown RBP17.11■□□□□ 0.33
SMN2-213ENST00000614240 FDFT1P37268 417 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 OR1D4P47884 311 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 PER3P56645 1201 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 KLF1Q13351 362 aaPredicted RBP17.11■□□□□ 0.33
SMN2-213ENST00000614240 FCRL6Q6DN72 434 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 PTRHD1Q6GMV3 140 aaKnown RBP17.11■□□□□ 0.33
SMN2-213ENST00000614240 KIRREL2Q6UWL6 708 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 RAD9BQ6WBX8 426 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 KCNMB4Q86W47 210 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 KRT222Q8N1A0 295 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 RAB42Q8N4Z0 105 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 LKAAEAR1Q8TD35 194 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 MRFAP1L1Q96HT8 127 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 THOC3Q96J01 351 aaKnown RBP17.11■□□□□ 0.33
SMN2-213ENST00000614240 BARD1Q99728 777 aaKnown RBP17.11■□□□□ 0.33
SMN2-213ENST00000614240 RAB11FIP5Q9BXF6 653 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 LHPPQ9H008 270 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 SLC26A1Q9H2B4 701 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 SEMA3GQ9NS98 782 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 IL1RAPL1Q9NZN1 696 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 CTSFQ9UBX1 484 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 OSGIN2Q9Y236 505 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 HS3ST3B1Q9Y662 390 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 MAU2Q9Y6X3 613 aa17.11■□□□□ 0.33
SMN2-213ENST00000614240 CCDC88CQ9P219 2028 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 FER1L5A0AVI2 2057 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 TCRBV7S2A1N4TA0A589 114 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 RASGRF2O14827 1237 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 GPC4O75487 556 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 ONECUT2O95948 504 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 GCGRP47871 477 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 VSX2P58304 361 aaPredicted RBP17.1■□□□□ 0.33
SMN2-213ENST00000614240 ZNF169Q14929 603 aaPredicted RBP17.1■□□□□ 0.33
SMN2-213ENST00000614240 LDB1Q86U70 411 aaPredicted RBP17.1■□□□□ 0.33
SMN2-213ENST00000614240 GRHL3Q8TE85 626 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 ATG4AQ8WYN0 398 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 ZUFSPQ96AP4 578 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 ZNF778Q96MU6 729 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 SPSB2Q99619 263 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 RIMKLBQ9ULI2 386 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 FAM169AQ9Y6X4 670 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 CREBBPQ92793 2442 aa17.1■□□□□ 0.33
SMN2-213ENST00000614240 DOPEY1Q5JWR5 2465 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 PRMT5O14744 637 aaPredicted RBP17.09■□□□□ 0.33
SMN2-213ENST00000614240 LRRTM2O43300 516 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 SLCO2B1O94956 709 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 FKBP9O95302 570 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 AOAHP28039 575 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 GRIA1P42261 906 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 TSFMP43897 325 aaKnown RBP17.09■□□□□ 0.33
SMN2-213ENST00000614240 OCA2Q04671 838 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 KIF5AQ12840 1032 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 SEMA3AQ14563 771 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 TLR1Q15399 786 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 WASHC2DQ5SRD0 308 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 ISLR2Q6UXK2 745 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 ZNF534Q76KX8 674 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 COX15Q7KZN9 410 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 PRSS58Q8IYP2 241 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 TXLNBQ8N3L3 684 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 PPHLN1Q8NEY8 458 aaKnown RBP17.09■□□□□ 0.33
SMN2-213ENST00000614240 RAD51AP1Q96B01 352 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 PANX3Q96QZ0 392 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 MIPEPQ99797 713 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 CRB3Q9BUF7 120 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 MENTQ9BUN1 341 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 ZNF304Q9HCX3 659 aa17.09■□□□□ 0.33
SMN2-213ENST00000614240 CATSPERZQ9NTU4 200 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms